RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
SMAD5-210ENST00000515005 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
SMAD5-210ENST00000515005 FLT4P35916 1363 aa16.74■□□□□ 0.27
SMAD5-210ENST00000515005 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
SMAD5-210ENST00000515005 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
SMAD5-210ENST00000515005 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
SMAD5-210ENST00000515005 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
SMAD5-210ENST00000515005 FYB1O15117 783 aa16.72■□□□□ 0.27
SMAD5-210ENST00000515005 MCOLN1Q9GZU1 580 aa16.72■□□□□ 0.27
SMAD5-210ENST00000515005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.274e-12■□□□□ 9.3
SMAD5-210ENST00000515005 TSKSQ9UJT2 592 aa16.72■□□□□ 0.27
SMAD5-210ENST00000515005 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
SMAD5-210ENST00000515005 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
SMAD5-210ENST00000515005 SCN4AP35499 1836 aa16.71■□□□□ 0.27
SMAD5-210ENST00000515005 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SMAD5-210ENST00000515005 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
SMAD5-210ENST00000515005 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
SMAD5-210ENST00000515005 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
SMAD5-210ENST00000515005 NFIXQ14938 502 aa16.7■□□□□ 0.26
SMAD5-210ENST00000515005 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
SMAD5-210ENST00000515005 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
SMAD5-210ENST00000515005 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
SMAD5-210ENST00000515005 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
SMAD5-210ENST00000515005 H0YIN7 160 aa16.69■□□□□ 0.26
SMAD5-210ENST00000515005 C21orf2O43822 256 aa16.69■□□□□ 0.26
SMAD5-210ENST00000515005 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
SMAD5-210ENST00000515005 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
SMAD5-210ENST00000515005 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
SMAD5-210ENST00000515005 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
SMAD5-210ENST00000515005 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
SMAD5-210ENST00000515005 ZPR1O75312 459 aa16.68■□□□□ 0.26
SMAD5-210ENST00000515005 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
SMAD5-210ENST00000515005 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
SMAD5-210ENST00000515005 SERPINB2P05120 415 aa16.67■□□□□ 0.26
SMAD5-210ENST00000515005 INTS5Q6P9B9 1019 aaKnown RBP16.67■□□□□ 0.26
SMAD5-210ENST00000515005 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
SMAD5-210ENST00000515005 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
SMAD5-210ENST00000515005 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 TJP1Q07157 1748 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 MAP1SQ66K74 1059 aaPredicted RBP16.66■□□□□ 0.26
SMAD5-210ENST00000515005 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 EYA1Q99502 592 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
SMAD5-210ENST00000515005 GRM1Q13255 1194 aa16.65■□□□□ 0.26
SMAD5-210ENST00000515005 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMAD5-210ENST00000515005 GPR101Q96P66 508 aaPredicted RBP16.65■□□□□ 0.26
SMAD5-210ENST00000515005 LTBP3Q9NS15 1303 aa16.65■□□□□ 0.26
SMAD5-210ENST00000515005 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
SMAD5-210ENST00000515005 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
SMAD5-210ENST00000515005 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
SMAD5-210ENST00000515005 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
SMAD5-210ENST00000515005 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
SMAD5-210ENST00000515005 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
SMAD5-210ENST00000515005 DGKZQ13574 1117 aa16.63■□□□□ 0.25
SMAD5-210ENST00000515005 CYP4F22Q6NT55 531 aa16.63■□□□□ 0.25
SMAD5-210ENST00000515005 EPHX2P34913 555 aa16.62■□□□□ 0.25
SMAD5-210ENST00000515005 CABP4P57796 275 aa16.62■□□□□ 0.25
SMAD5-210ENST00000515005 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
SMAD5-210ENST00000515005 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
SMAD5-210ENST00000515005 ECE1P42892 770 aa16.61■□□□□ 0.25
SMAD5-210ENST00000515005 NARFQ9UHQ1 456 aa16.61■□□□□ 0.25
SMAD5-210ENST00000515005 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
SMAD5-210ENST00000515005 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
SMAD5-210ENST00000515005 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
SMAD5-210ENST00000515005 SOX10P56693 466 aa16.6■□□□□ 0.25
SMAD5-210ENST00000515005 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD5-210ENST00000515005 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
SMAD5-210ENST00000515005 DDX21Q9NR30 783 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD5-210ENST00000515005 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
SMAD5-210ENST00000515005 CACNA1SQ13698 1873 aa16.6■□□□□ 0.25
SMAD5-210ENST00000515005 AOC2O75106 756 aa16.59■□□□□ 0.25
SMAD5-210ENST00000515005 ZNF541Q9H0D2 1346 aa16.59■□□□□ 0.25
SMAD5-210ENST00000515005 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
SMAD5-210ENST00000515005 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
SMAD5-210ENST00000515005 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
SMAD5-210ENST00000515005 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
SMAD5-210ENST00000515005 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
SMAD5-210ENST00000515005 WASHC2AQ641Q2 1341 aa16.57■□□□□ 0.24
SMAD5-210ENST00000515005 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
SMAD5-210ENST00000515005 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
SMAD5-210ENST00000515005 TESK2Q96S53 571 aa16.57■□□□□ 0.24
SMAD5-210ENST00000515005 MAP2K2P36507 400 aa16.56■□□□□ 0.24
SMAD5-210ENST00000515005 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
SMAD5-210ENST00000515005 COL15A1P39059 1388 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 CA12O43570 354 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 PDE6BP35913 854 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 CST9Q5W186 159 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
SMAD5-210ENST00000515005 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
SMAD5-210ENST00000515005 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
SMAD5-210ENST00000515005 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
SMAD5-210ENST00000515005 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
SMAD5-210ENST00000515005 MTHFSP49914 203 aa16.53■□□□□ 0.24
SMAD5-210ENST00000515005 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
SMAD5-210ENST00000515005 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
SMAD5-210ENST00000515005 TLL2Q9Y6L7 1015 aa16.53■□□□□ 0.24
SMAD5-210ENST00000515005 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms