RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.73
SGCA-211ENST00000514934 KCNQ3O43525 872 aa19.63■□□□□ 0.73
SGCA-211ENST00000514934 FKBP8Q14318 412 aa19.63■□□□□ 0.73
SGCA-211ENST00000514934 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
SGCA-211ENST00000514934 COL15A1P39059 1388 aa19.62■□□□□ 0.73
SGCA-211ENST00000514934 RFC4P35249 363 aa19.62■□□□□ 0.73
SGCA-211ENST00000514934 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
SGCA-211ENST00000514934 SBF1O95248 1867 aa19.61■□□□□ 0.73
SGCA-211ENST00000514934 ADCY9O60503 1353 aa19.6■□□□□ 0.73
SGCA-211ENST00000514934 TM4SF1P30408 202 aa19.6■□□□□ 0.73
SGCA-211ENST00000514934 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
SGCA-211ENST00000514934 TEFQ10587 303 aa19.59■□□□□ 0.73
SGCA-211ENST00000514934 MCM10Q7L590 875 aa19.59■□□□□ 0.73
SGCA-211ENST00000514934 COL11A2P13942 1736 aaPredicted RBP19.59■□□□□ 0.73
SGCA-211ENST00000514934 DCTN1Q14203 1278 aa19.58■□□□□ 0.72
SGCA-211ENST00000514934 NARFQ9UHQ1 456 aa19.58■□□□□ 0.72
SGCA-211ENST00000514934 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
SGCA-211ENST00000514934 KCNA3P22001 575 aa19.57■□□□□ 0.72
SGCA-211ENST00000514934 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
SGCA-211ENST00000514934 HTATSF1O43719 755 aaKnown RBP19.56■□□□□ 0.72
SGCA-211ENST00000514934 GRIN3BO60391 1043 aa19.56■□□□□ 0.72
SGCA-211ENST00000514934 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
SGCA-211ENST00000514934 USPL1Q5W0Q7 1092 aa19.56■□□□□ 0.72
SGCA-211ENST00000514934 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
SGCA-211ENST00000514934 RALBP1Q15311 655 aa19.55■□□□□ 0.72
SGCA-211ENST00000514934 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
SGCA-211ENST00000514934 NUP98P52948 1817 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 BTBD11A6QL63 1104 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 TGFB2P61812 414 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 NFIXQ14938 502 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 FMNL2Q96PY5 1086 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 CCDC88AQ3V6T2 1871 aa19.54■□□□□ 0.72
SGCA-211ENST00000514934 DPEP1P16444 411 aa19.53■□□□□ 0.72
SGCA-211ENST00000514934 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
SGCA-211ENST00000514934 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
SGCA-211ENST00000514934 ARFGEF2Q9Y6D5 1785 aa19.52■□□□□ 0.72
SGCA-211ENST00000514934 CACNA1SQ13698 1873 aa19.52■□□□□ 0.72
SGCA-211ENST00000514934 A0A0G2JLW4 131 aa19.52■□□□□ 0.72
SGCA-211ENST00000514934 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
SGCA-211ENST00000514934 USP16Q9Y5T5 823 aa19.52■□□□□ 0.72
SGCA-211ENST00000514934 CARMIL3Q8ND23 1372 aa19.52■□□□□ 0.72
SGCA-211ENST00000514934 STARD3NLO95772 234 aa19.51■□□□□ 0.71
SGCA-211ENST00000514934 A1BGP04217 495 aa19.51■□□□□ 0.71
SGCA-211ENST00000514934 C1QTNF8P60827 252 aa19.51■□□□□ 0.71
SGCA-211ENST00000514934 TEX13AQ9BXU3 409 aaPredicted RBP19.51■□□□□ 0.71
SGCA-211ENST00000514934 ZPR1O75312 459 aa19.5■□□□□ 0.71
SGCA-211ENST00000514934 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
SGCA-211ENST00000514934 NFE2L2Q16236 605 aa19.5■□□□□ 0.71
SGCA-211ENST00000514934 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
SGCA-211ENST00000514934 ATP10DQ9P241 1426 aa19.49■□□□□ 0.71
SGCA-211ENST00000514934 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
SGCA-211ENST00000514934 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
SGCA-211ENST00000514934 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
SGCA-211ENST00000514934 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
SGCA-211ENST00000514934 THUMPD2Q9BTF0 503 aaKnown RBP19.48■□□□□ 0.71
SGCA-211ENST00000514934 FER1L6Q2WGJ9 1857 aa19.48■□□□□ 0.71
SGCA-211ENST00000514934 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
SGCA-211ENST00000514934 CAMTA2O94983 1202 aa19.47■□□□□ 0.71
SGCA-211ENST00000514934 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
SGCA-211ENST00000514934 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
SGCA-211ENST00000514934 PIP4K2AP48426 406 aaPredicted RBP19.46■□□□□ 0.71
SGCA-211ENST00000514934 TBC1D9BQ66K14 1250 aa19.46■□□□□ 0.71
SGCA-211ENST00000514934 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
SGCA-211ENST00000514934 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
SGCA-211ENST00000514934 CHRNA5P30532 468 aa19.45■□□□□ 0.7
SGCA-211ENST00000514934 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
SGCA-211ENST00000514934 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
SGCA-211ENST00000514934 A0A087WZG4 1122 aa19.44■□□□□ 0.7
SGCA-211ENST00000514934 SERPINB2P05120 415 aa19.44■□□□□ 0.7
SGCA-211ENST00000514934 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
SGCA-211ENST00000514934 BCS1LQ9Y276 419 aa19.43■□□□□ 0.7
SGCA-211ENST00000514934 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
SGCA-211ENST00000514934 EIF4A1P60842 406 aaKnown RBP19.42■□□□□ 0.7
SGCA-211ENST00000514934 TNRC6CQ9HCJ0 1690 aaKnown RBP19.42■□□□□ 0.7
SGCA-211ENST00000514934 ANKRD36CQ5JPF3 1778 aa19.42■□□□□ 0.7
SGCA-211ENST00000514934 TMPOP42166 694 aaKnown RBP19.41■□□□□ 0.7
SGCA-211ENST00000514934 TIAM2Q8IVF5 1701 aa19.41■□□□□ 0.7
SGCA-211ENST00000514934 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
SGCA-211ENST00000514934 PIM2Q9P1W9 311 aa19.4■□□□□ 0.7
SGCA-211ENST00000514934 PRR5LQ6MZQ0 368 aa19.39■□□□□ 0.69
SGCA-211ENST00000514934 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.69
SGCA-211ENST00000514934 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
SGCA-211ENST00000514934 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
SGCA-211ENST00000514934 DZIP3Q86Y13 1208 aaKnown RBP19.38■□□□□ 0.69
SGCA-211ENST00000514934 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
SGCA-211ENST00000514934 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
SGCA-211ENST00000514934 RGL2O15211 777 aa19.37■□□□□ 0.69
SGCA-211ENST00000514934 DALRD3Q5D0E6 543 aaKnown RBP19.37■□□□□ 0.69
SGCA-211ENST00000514934 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
SGCA-211ENST00000514934 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
SGCA-211ENST00000514934 PRELPP51888 382 aa19.36■□□□□ 0.69
SGCA-211ENST00000514934 RIPK4P57078 832 aa19.36■□□□□ 0.69
SGCA-211ENST00000514934 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
SGCA-211ENST00000514934 ADAMTS8Q9UP79 889 aa19.36■□□□□ 0.69
SGCA-211ENST00000514934 LAMB2P55268 1798 aa19.35■□□□□ 0.69
SGCA-211ENST00000514934 NEFMP07197 916 aa19.35■□□□□ 0.69
SGCA-211ENST00000514934 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
SGCA-211ENST00000514934 HLFQ16534 295 aa19.34■□□□□ 0.69
SGCA-211ENST00000514934 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms