RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PLEKHF1Q96S99 279 aa32.48■■■□□ 2.79
SNF8-213ENST00000514929 MAPK8IP3Q9UPT6 1336 aa32.48■■■□□ 2.79
SNF8-213ENST00000514929 CANXP27824 592 aaKnown RBP32.47■■■□□ 2.79
SNF8-213ENST00000514929 COL15A1P39059 1388 aa32.46■■■□□ 2.79
SNF8-213ENST00000514929 KCNQ3O43525 872 aa32.46■■■□□ 2.79
SNF8-213ENST00000514929 YBX3P16989 372 aaKnown RBP eCLIP32.46■■■□□ 2.797e-7■□□□□ 10.8
SNF8-213ENST00000514929 FKBP8Q14318 412 aa32.46■■■□□ 2.79
SNF8-213ENST00000514929 GRIN3BO60391 1043 aa32.45■■■□□ 2.79
SNF8-213ENST00000514929 CHD4Q14839 1912 aa32.45■■■□□ 2.78
SNF8-213ENST00000514929 GOLGB1Q14789 3259 aaKnown RBP32.45■■■□□ 2.78
SNF8-213ENST00000514929 USPL1Q5W0Q7 1092 aa32.44■■■□□ 2.78
SNF8-213ENST00000514929 NFE2L2Q16236 605 aa32.43■■■□□ 2.78
SNF8-213ENST00000514929 NARFQ9UHQ1 456 aa32.42■■■□□ 2.78
SNF8-213ENST00000514929 DLG5Q8TDM6 1919 aa32.41■■■□□ 2.78
SNF8-213ENST00000514929 TAF7Q15545 349 aaPredicted RBP32.4■■■□□ 2.78
SNF8-213ENST00000514929 WWC3Q9ULE0 1092 aa32.4■■■□□ 2.78
SNF8-213ENST00000514929 C10orf71Q711Q0 1435 aa32.4■■■□□ 2.78
SNF8-213ENST00000514929 KIF13BQ9NQT8 1826 aa32.39■■■□□ 2.78
SNF8-213ENST00000514929 EIF5P55010 431 aaKnown RBP32.38■■■□□ 2.77
SNF8-213ENST00000514929 DDR1Q08345 913 aa32.38■■■□□ 2.77
SNF8-213ENST00000514929 ZNF330Q9Y3S2 320 aaPredicted RBP32.38■■■□□ 2.77
SNF8-213ENST00000514929 A0A087WZG4 1122 aa32.37■■■□□ 2.77
SNF8-213ENST00000514929 TGFB2P61812 414 aa32.37■■■□□ 2.77
SNF8-213ENST00000514929 PXDNLA1KZ92 1463 aa32.35■■■□□ 2.77
SNF8-213ENST00000514929 A1BGP04217 495 aa32.35■■■□□ 2.77
SNF8-213ENST00000514929 SNRPA1P09661 255 aaKnown RBP32.35■■■□□ 2.77
SNF8-213ENST00000514929 TM4SF1P30408 202 aa32.35■■■□□ 2.77
SNF8-213ENST00000514929 NPM2Q86SE8 214 aaKnown RBP32.35■■■□□ 2.77
SNF8-213ENST00000514929 PRKRIP1Q9H875 184 aaPredicted RBP32.35■■■□□ 2.77
SNF8-213ENST00000514929 IL6STP40189 918 aaPredicted RBP32.34■■■□□ 2.77
SNF8-213ENST00000514929 MIS18AQ9NYP9 233 aa32.34■■■□□ 2.77
SNF8-213ENST00000514929 USP16Q9Y5T5 823 aa32.34■■■□□ 2.77
SNF8-213ENST00000514929 POLRMTO00411 1230 aaKnown RBP32.33■■■□□ 2.77
SNF8-213ENST00000514929 PNISRQ8TF01 805 aaKnown RBP32.33■■■□□ 2.77
SNF8-213ENST00000514929 A0A0G2JLW4 131 aa32.32■■■□□ 2.76
SNF8-213ENST00000514929 PRAMEF22A3QJZ6 481 aa32.32■■■□□ 2.76
SNF8-213ENST00000514929 WDR43Q15061 677 aaKnown RBP eCLIP32.32■■■□□ 2.76
SNF8-213ENST00000514929 THUMPD2Q9BTF0 503 aaKnown RBP32.32■■■□□ 2.76
SNF8-213ENST00000514929 BCL2L12Q9HB09 334 aa32.32■■■□□ 2.76
SNF8-213ENST00000514929 N4BP2Q86UW6 1770 aaPredicted RBP32.32■■■□□ 2.76
SNF8-213ENST00000514929 KIAA1551Q9HCM1 1747 aa32.31■■■□□ 2.76
SNF8-213ENST00000514929 NFIXQ14938 502 aa32.31■■■□□ 2.76
SNF8-213ENST00000514929 ZNF784Q8NCA9 323 aaPredicted RBP32.3■■■□□ 2.76
SNF8-213ENST00000514929 DPEP1P16444 411 aa32.29■■■□□ 2.76
SNF8-213ENST00000514929 RIPK4P57078 832 aa32.29■■■□□ 2.76
SNF8-213ENST00000514929 TBC1D2BQ9UPU7 963 aa32.29■■■□□ 2.76
SNF8-213ENST00000514929 CCDC146Q8IYE0 955 aa32.27■■■□□ 2.76
SNF8-213ENST00000514929 TMPOP42166 694 aaKnown RBP32.26■■■□□ 2.75
SNF8-213ENST00000514929 PIP4K2AP48426 406 aaPredicted RBP32.26■■■□□ 2.75
SNF8-213ENST00000514929 KDM3BQ7LBC6 1761 aa32.26■■■□□ 2.75
SNF8-213ENST00000514929 BICDL1Q6ZP65 573 aa32.25■■■□□ 2.75
SNF8-213ENST00000514929 BCS1LQ9Y276 419 aa32.25■■■□□ 2.75
SNF8-213ENST00000514929 SCN7AQ01118 1682 aa32.24■■■□□ 2.75
SNF8-213ENST00000514929 SERPINB2P05120 415 aa32.24■■■□□ 2.75
SNF8-213ENST00000514929 LMOD3Q0VAK6 560 aa32.24■■■□□ 2.75
SNF8-213ENST00000514929 DZIP3Q86Y13 1208 aaKnown RBP32.23■■■□□ 2.75
SNF8-213ENST00000514929 AFDNP55196 1824 aaKnown RBP32.22■■■□□ 2.75
SNF8-213ENST00000514929 RUNDC1Q96C34 613 aa32.22■■■□□ 2.75
SNF8-213ENST00000514929 ADAMTS8Q9UP79 889 aa32.22■■■□□ 2.75
SNF8-213ENST00000514929 RRP7AQ9Y3A4 280 aaKnown RBP32.22■■■□□ 2.75
SNF8-213ENST00000514929 TBC1D9BQ66K14 1250 aa32.21■■■□□ 2.75
SNF8-213ENST00000514929 KCNA3P22001 575 aa32.2■■■□□ 2.75
SNF8-213ENST00000514929 EIF4A1P60842 406 aaKnown RBP32.2■■■□□ 2.75
SNF8-213ENST00000514929 NEUROD2Q15784 382 aa32.2■■■□□ 2.75
SNF8-213ENST00000514929 LAMB4A4D0S4 1761 aa32.19■■■□□ 2.74
SNF8-213ENST00000514929 CAMTA2O94983 1202 aa32.19■■■□□ 2.74
SNF8-213ENST00000514929 PIM2Q9P1W9 311 aa32.19■■■□□ 2.74
SNF8-213ENST00000514929 TSPYL4Q9UJ04 414 aa32.19■■■□□ 2.74
SNF8-213ENST00000514929 NRXN2Q9P2S2 1712 aa32.19■■■□□ 2.74
SNF8-213ENST00000514929 NBPF26B4DH59 902 aa32.18■■■□□ 2.74
SNF8-213ENST00000514929 GIGYF1O75420 1035 aaPredicted RBP32.18■■■□□ 2.74
SNF8-213ENST00000514929 CHRNA5P30532 468 aa32.18■■■□□ 2.74
SNF8-213ENST00000514929 NBPF10Q6P3W6 841 aaKnown RBP32.18■■■□□ 2.74
SNF8-213ENST00000514929 NBPF15Q8N660 670 aa32.18■■■□□ 2.74
SNF8-213ENST00000514929 BRCA1P38398 1863 aaKnown RBP32.17■■■□□ 2.74
SNF8-213ENST00000514929 ZNF316A6NFI3 1004 aaPredicted RBP32.17■■■□□ 2.74
SNF8-213ENST00000514929 BCORQ6W2J9 1755 aa32.15■■■□□ 2.74
SNF8-213ENST00000514929 CARMIL3Q8ND23 1372 aa32.15■■■□□ 2.74
SNF8-213ENST00000514929 DALRD3Q5D0E6 543 aaKnown RBP32.14■■■□□ 2.74
SNF8-213ENST00000514929 SETDB2Q96T68 719 aa32.14■■■□□ 2.74
SNF8-213ENST00000514929 ZNF652Q9Y2D9 606 aa32.13■■■□□ 2.73
SNF8-213ENST00000514929 ARHGAP27Q6ZUM4 889 aa32.12■■■□□ 2.73
SNF8-213ENST00000514929 BABAM1Q9NWV8 329 aa32.12■■■□□ 2.73
SNF8-213ENST00000514929 NPHP1O15259 732 aa32.1■■■□□ 2.73
SNF8-213ENST00000514929 CLEC4GQ6UXB4 293 aa32.1■■■□□ 2.73
SNF8-213ENST00000514929 ARFGEF1Q9Y6D6 1849 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 PRR5LQ6MZQ0 368 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 C2CD5Q86YS7 1000 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 NGEFQ8N5V2 710 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 TRIM35Q9UPQ4 493 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 ATP10DQ9P241 1426 aa32.08■■■□□ 2.73
SNF8-213ENST00000514929 H0YIN7 160 aa32.07■■■□□ 2.72
SNF8-213ENST00000514929 CNBD1Q8NA66 436 aa32.07■■■□□ 2.72
SNF8-213ENST00000514929 CCDC24Q8N4L8 307 aa32.06■■■□□ 2.72
SNF8-213ENST00000514929 RGL2O15211 777 aa32.05■■■□□ 2.72
SNF8-213ENST00000514929 MYL6BP14649 208 aa32.05■■■□□ 2.72
SNF8-213ENST00000514929 BRIP1Q9BX63 1249 aa32.05■■■□□ 2.72
SNF8-213ENST00000514929 LAS1LQ9Y4W2 734 aaKnown RBP32.05■■■□□ 2.72
SNF8-213ENST00000514929 ADCY9O60503 1353 aa32.05■■■□□ 2.72
SNF8-213ENST00000514929 PDE6BP35913 854 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms