RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
NEDD9-215ENST00000514660 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
NEDD9-215ENST00000514660 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
NEDD9-215ENST00000514660 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
NEDD9-215ENST00000514660 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
NEDD9-215ENST00000514660 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
NEDD9-215ENST00000514660 FER1L6Q2WGJ9 1857 aa14.84□□□□□ -0.03
NEDD9-215ENST00000514660 CARD14Q9BXL6 1004 aa14.84□□□□□ -0.03
NEDD9-215ENST00000514660 ANKRD31Q8N7Z5 1873 aa14.83□□□□□ -0.04
NEDD9-215ENST00000514660 PTCD1O75127 700 aaKnown RBP14.83□□□□□ -0.04
NEDD9-215ENST00000514660 KCNA4P22459 653 aa14.83□□□□□ -0.04
NEDD9-215ENST00000514660 NFIXQ14938 502 aa14.83□□□□□ -0.04
NEDD9-215ENST00000514660 USPL1Q5W0Q7 1092 aa14.83□□□□□ -0.04
NEDD9-215ENST00000514660 BCL2L12Q9HB09 334 aa14.83□□□□□ -0.04
NEDD9-215ENST00000514660 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
NEDD9-215ENST00000514660 DDNO94850 711 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-215ENST00000514660 RGS19P49795 217 aa14.82□□□□□ -0.04
NEDD9-215ENST00000514660 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
NEDD9-215ENST00000514660 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-215ENST00000514660 ITGBL1O95965 494 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-215ENST00000514660 COL11A2P13942 1736 aaPredicted RBP14.8□□□□□ -0.04
NEDD9-215ENST00000514660 TTLL6Q8N841 843 aa14.8□□□□□ -0.04
NEDD9-215ENST00000514660 MLLT1Q03111 559 aaPredicted RBP14.79□□□□□ -0.04
NEDD9-215ENST00000514660 ADAMTSL1Q8N6G6 1762 aa14.79□□□□□ -0.04
NEDD9-215ENST00000514660 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
NEDD9-215ENST00000514660 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
NEDD9-215ENST00000514660 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
NEDD9-215ENST00000514660 C2CD5Q86YS7 1000 aa14.78□□□□□ -0.04
NEDD9-215ENST00000514660 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
NEDD9-215ENST00000514660 SERPINB2P05120 415 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 CABP4P57796 275 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 AIDAQ96BJ3 306 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 POLKQ9UBT6 870 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 SLX4Q8IY92 1834 aa14.77□□□□□ -0.05
NEDD9-215ENST00000514660 CCDC85CA6NKD9 419 aa14.76□□□□□ -0.05
NEDD9-215ENST00000514660 C21orf2O43822 256 aa14.76□□□□□ -0.05
NEDD9-215ENST00000514660 NFATC2IPQ8NCF5 419 aa14.76□□□□□ -0.05
NEDD9-215ENST00000514660 TMEM88BA6NKF7 163 aa14.75□□□□□ -0.05
NEDD9-215ENST00000514660 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
NEDD9-215ENST00000514660 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
NEDD9-215ENST00000514660 CACNA1SQ13698 1873 aa14.75□□□□□ -0.05
NEDD9-215ENST00000514660 SCN4AP35499 1836 aa14.75□□□□□ -0.05
NEDD9-215ENST00000514660 RASSF10A6NK89 507 aa14.74□□□□□ -0.05
NEDD9-215ENST00000514660 NARFQ9UHQ1 456 aa14.74□□□□□ -0.05
NEDD9-215ENST00000514660 TNRC18O15417 2968 aaPredicted RBP14.74□□□□□ -0.05
NEDD9-215ENST00000514660 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
NEDD9-215ENST00000514660 ZPR1O75312 459 aa14.73□□□□□ -0.05
NEDD9-215ENST00000514660 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-215ENST00000514660 FMR1Q06787 632 aaKnown RBP eCLIP14.73□□□□□ -0.05
NEDD9-215ENST00000514660 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-215ENST00000514660 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
NEDD9-215ENST00000514660 LDHDQ86WU2 507 aa14.73□□□□□ -0.05
NEDD9-215ENST00000514660 SCN11AQ9UI33 1791 aa14.73□□□□□ -0.05
NEDD9-215ENST00000514660 H0YIN7 160 aa14.72□□□□□ -0.05
NEDD9-215ENST00000514660 ZBTB1Q9Y2K1 713 aa14.72□□□□□ -0.05
NEDD9-215ENST00000514660 WDR33Q9C0J8 1336 aaKnown RBP14.71□□□□□ -0.05
NEDD9-215ENST00000514660 LTBP3Q9NS15 1303 aa14.71□□□□□ -0.05
NEDD9-215ENST00000514660 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
NEDD9-215ENST00000514660 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
NEDD9-215ENST00000514660 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
NEDD9-215ENST00000514660 COL15A1P39059 1388 aa14.71□□□□□ -0.06
NEDD9-215ENST00000514660 ZNF541Q9H0D2 1346 aa14.7□□□□□ -0.06
NEDD9-215ENST00000514660 HSP90AB1P08238 724 aaKnown RBP14.7□□□□□ -0.06
NEDD9-215ENST00000514660 MTHFSP49914 203 aa14.7□□□□□ -0.06
NEDD9-215ENST00000514660 DEFB115Q30KQ5 88 aa14.7□□□□□ -0.06
NEDD9-215ENST00000514660 BICDL1Q6ZP65 573 aa14.7□□□□□ -0.06
NEDD9-215ENST00000514660 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.06
NEDD9-215ENST00000514660 LTBP1Q14766 1721 aa14.69□□□□□ -0.06
NEDD9-215ENST00000514660 CASP8AP2Q9UKL3 1982 aa14.69□□□□□ -0.06
NEDD9-215ENST00000514660 MAP1SQ66K74 1059 aaPredicted RBP14.69□□□□□ -0.06
NEDD9-215ENST00000514660 TAOK3Q9H2K8 898 aa14.69□□□□□ -0.06
NEDD9-215ENST00000514660 PDE4DIPQ5VU43 2346 aa14.69□□□□□ -0.06
NEDD9-215ENST00000514660 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
NEDD9-215ENST00000514660 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
NEDD9-215ENST00000514660 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
NEDD9-215ENST00000514660 TBC1D9BQ66K14 1250 aa14.68□□□□□ -0.06
NEDD9-215ENST00000514660 ARFGEF2Q9Y6D5 1785 aa14.68□□□□□ -0.06
NEDD9-215ENST00000514660 PRR5LQ6MZQ0 368 aa14.67□□□□□ -0.06
NEDD9-215ENST00000514660 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-215ENST00000514660 MAP2K1Q02750 393 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-215ENST00000514660 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
NEDD9-215ENST00000514660 CNTROBQ8N137 903 aa14.66□□□□□ -0.06
NEDD9-215ENST00000514660 C7orf43Q8WVR3 580 aa14.66□□□□□ -0.06
NEDD9-215ENST00000514660 LGR6Q9HBX8 967 aa14.66□□□□□ -0.06
NEDD9-215ENST00000514660 IQCA1LA6NCM1 817 aa14.65□□□□□ -0.06
NEDD9-215ENST00000514660 BRIP1Q9BX63 1249 aa14.65□□□□□ -0.06
NEDD9-215ENST00000514660 MCOLN1Q9GZU1 580 aa14.65□□□□□ -0.06
NEDD9-215ENST00000514660 EPHX2P34913 555 aa14.64□□□□□ -0.07
NEDD9-215ENST00000514660 CYP4F22Q6NT55 531 aa14.64□□□□□ -0.07
NEDD9-215ENST00000514660 PRPF40BQ6NWY9 871 aaKnown RBP14.64□□□□□ -0.07
NEDD9-215ENST00000514660 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
NEDD9-215ENST00000514660 SCN7AQ01118 1682 aa14.64□□□□□ -0.07
NEDD9-215ENST00000514660 RNF123Q5XPI4 1314 aa14.64□□□□□ -0.07
NEDD9-215ENST00000514660 COL4A5P29400 1685 aa14.63□□□□□ -0.07
NEDD9-215ENST00000514660 AOC2O75106 756 aa14.63□□□□□ -0.07
NEDD9-215ENST00000514660 SRGNP10124 158 aa14.63□□□□□ -0.07
NEDD9-215ENST00000514660 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
NEDD9-215ENST00000514660 EIF5P55010 431 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms