RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 RNF41Q9H4P4 317 aaPredicted RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 MINDY4BA8MYZ0 360 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 NAP1L1P55209 391 aaKnown RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 FOXD4L6Q3SYB3 417 aaPredicted RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 FOXD4L3Q6VB84 417 aaPredicted RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
CCDC30-214ENST00000514642 YEATS2Q9ULM3 1422 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 UQCRFS1P1P0C7P4 283 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 SASS6Q6UVJ0 657 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 MAP3K2Q9Y2U5 619 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 NAPBQ9H115 298 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 VEZTQ9HBM0 779 aa8.84□□□□□ -0.99
CCDC30-214ENST00000514642 PDE6BP35913 854 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 TCIRG1Q13488 830 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 HSP90AB2PQ58FF8 381 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 ZC3H12CQ9C0D7 883 aaKnown RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 CYP46A1Q9Y6A2 500 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 KDM6BO15054 1643 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 ATP2B1P20020 1258 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 TRAF1Q13077 416 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 KRT32Q14532 448 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 JMYQ8N9B5 988 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 PDCL3Q9H2J4 239 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 CRNKL1Q9BZJ0 848 aaKnown RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 MAP4K4O95819 1239 aaPredicted RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 CA8P35219 290 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 CNBD1Q8NA66 436 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 NPHP4O75161 1426 aaPredicted RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 STIM1Q13586 685 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 NAT10Q9H0A0 1025 aaKnown RBP8.83□□□□□ -1
CCDC30-214ENST00000514642 NEBLO76041 1014 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 CHMP5Q9NZZ3 219 aa8.83□□□□□ -1
CCDC30-214ENST00000514642 PDE4BQ07343 736 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 CCDC178Q5BJE1 867 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 DCAF5Q96JK2 942 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 PIK3R4Q99570 1358 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 BCAR3O75815 825 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 IQCA1Q86XH1 822 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 GZF1Q9H116 711 aaPredicted RBP8.82□□□□□ -1
CCDC30-214ENST00000514642 GCP02774 474 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 PDCP20941 246 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 RPAP2Q8IXW5 612 aaPredicted RBP8.82□□□□□ -1
CCDC30-214ENST00000514642 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
CCDC30-214ENST00000514642 MCM2P49736 904 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 NAP1L5Q96NT1 182 aaPredicted RBP8.81□□□□□ -1
CCDC30-214ENST00000514642 YTHDC2Q9H6S0 1430 aaKnown RBP8.81□□□□□ -1
CCDC30-214ENST00000514642 SHANK2Q9UPX8 1470 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 ZNF408Q9H9D4 720 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 PTPRCP08575 1304 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 FLT4P35916 1363 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 DCTN1Q14203 1278 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 KIF22Q14807 665 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 BAG4O95429 457 aaKnown RBP8.81□□□□□ -1
CCDC30-214ENST00000514642 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 CHD1O14646 1710 aa8.81□□□□□ -1
CCDC30-214ENST00000514642 MAST1Q9Y2H9 1570 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 CTCFLQ8NI51 663 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 F8W031 263 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 RANBP6O60518 1105 aaKnown RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 ALDH1L2Q3SY69 923 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 EAPPQ56P03 285 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 PDE3AQ14432 1141 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 ANKRD13DQ6ZTN6 518 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 U3KPZ7 1027 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 NUCB2P80303 420 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 CCDC150Q8NCX0 1101 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 CCDC12Q8WUD4 166 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 CCDC196A0A1B0GTZ2 297 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 RIMBP2O15034 1052 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 PLCG2P16885 1265 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 PPM1FP49593 454 aaPredicted RBP8.8□□□□□ -1
CCDC30-214ENST00000514642 ARHGEF6Q15052 776 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 NIM1KQ8IY84 436 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 CCDC173Q0VFZ6 552 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 STK38Q15208 465 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 FILIP1LQ4L180 1135 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 PIBF1Q8WXW3 757 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 PICK1Q9NRD5 415 aa8.8□□□□□ -1
CCDC30-214ENST00000514642 SSBP05455 408 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC30-214ENST00000514642 IP6K1Q92551 441 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 TMOD4Q9NZQ9 345 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 GOLGA6L3A6NEY3 463 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 ALDH1B1P30837 517 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 FAM196AQ6ZSG2 479 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 DACH1Q9UI36 760 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 PTPRKQ15262 1439 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 ATP5J2-PTCD1G3V325 749 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 POTEJP0CG39 1038 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 MYO5CQ9NQX4 1742 aa8.79□□□□□ -1
CCDC30-214ENST00000514642 CATIPQ7Z7H3 387 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 KAT14Q9H8E8 782 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms