RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
DDR1-275ENST00000514434 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
DDR1-275ENST00000514434 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
DDR1-275ENST00000514434 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
DDR1-275ENST00000514434 COL15A1P39059 1388 aa17.3■□□□□ 0.36
DDR1-275ENST00000514434 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
DDR1-275ENST00000514434 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
DDR1-275ENST00000514434 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
DDR1-275ENST00000514434 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
DDR1-275ENST00000514434 CHD4Q14839 1912 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 GRIN3BO60391 1043 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 A1BGP04217 495 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 DDR1Q08345 913 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
DDR1-275ENST00000514434 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
DDR1-275ENST00000514434 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
DDR1-275ENST00000514434 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
DDR1-275ENST00000514434 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
DDR1-275ENST00000514434 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
DDR1-275ENST00000514434 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
DDR1-275ENST00000514434 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
DDR1-275ENST00000514434 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
DDR1-275ENST00000514434 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
DDR1-275ENST00000514434 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
DDR1-275ENST00000514434 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
DDR1-275ENST00000514434 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
DDR1-275ENST00000514434 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
DDR1-275ENST00000514434 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
DDR1-275ENST00000514434 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 A0A087WZG4 1122 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
DDR1-275ENST00000514434 DPEP1P16444 411 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 TM4SF1P30408 202 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 NFIXQ14938 502 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 ZNF784Q8NCA9 323 aaPredicted RBP17.25■□□□□ 0.35
DDR1-275ENST00000514434 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
DDR1-275ENST00000514434 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
DDR1-275ENST00000514434 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
DDR1-275ENST00000514434 TGFB2P61812 414 aa17.24■□□□□ 0.35
DDR1-275ENST00000514434 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDR1-275ENST00000514434 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
DDR1-275ENST00000514434 BCS1LQ9Y276 419 aa17.24■□□□□ 0.35
DDR1-275ENST00000514434 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
DDR1-275ENST00000514434 N4BP2Q86UW6 1770 aaPredicted RBP17.24■□□□□ 0.35
DDR1-275ENST00000514434 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
DDR1-275ENST00000514434 RIPK4P57078 832 aa17.23■□□□□ 0.35
DDR1-275ENST00000514434 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
DDR1-275ENST00000514434 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
DDR1-275ENST00000514434 SERPINB2P05120 415 aa17.21■□□□□ 0.35
DDR1-275ENST00000514434 CHRNA5P30532 468 aa17.21■□□□□ 0.35
DDR1-275ENST00000514434 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
DDR1-275ENST00000514434 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
DDR1-275ENST00000514434 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
DDR1-275ENST00000514434 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
DDR1-275ENST00000514434 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
DDR1-275ENST00000514434 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 KCNA3P22001 575 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
DDR1-275ENST00000514434 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
DDR1-275ENST00000514434 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
DDR1-275ENST00000514434 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
DDR1-275ENST00000514434 ARHGAP27Q6ZUM4 889 aa17.17■□□□□ 0.34
DDR1-275ENST00000514434 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
DDR1-275ENST00000514434 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
DDR1-275ENST00000514434 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
DDR1-275ENST00000514434 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
DDR1-275ENST00000514434 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
DDR1-275ENST00000514434 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
DDR1-275ENST00000514434 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
DDR1-275ENST00000514434 NPHP1O15259 732 aa17.15■□□□□ 0.34
DDR1-275ENST00000514434 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
DDR1-275ENST00000514434 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
DDR1-275ENST00000514434 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
DDR1-275ENST00000514434 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
DDR1-275ENST00000514434 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
DDR1-275ENST00000514434 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
DDR1-275ENST00000514434 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
DDR1-275ENST00000514434 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
DDR1-275ENST00000514434 MYL6BP14649 208 aa17.13■□□□□ 0.33
DDR1-275ENST00000514434 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
DDR1-275ENST00000514434 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
DDR1-275ENST00000514434 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
DDR1-275ENST00000514434 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
DDR1-275ENST00000514434 ZNF652Q9Y2D9 606 aa17.12■□□□□ 0.33
DDR1-275ENST00000514434 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
DDR1-275ENST00000514434 H0YIN7 160 aa17.11■□□□□ 0.33
DDR1-275ENST00000514434 CNBD1Q8NA66 436 aa17.11■□□□□ 0.33
DDR1-275ENST00000514434 BRCA1P38398 1863 aaKnown RBP17.11■□□□□ 0.33
DDR1-275ENST00000514434 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
DDR1-275ENST00000514434 HLFQ16534 295 aa17.1■□□□□ 0.33
DDR1-275ENST00000514434 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
DDR1-275ENST00000514434 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
DDR1-275ENST00000514434 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDR1-275ENST00000514434 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDR1-275ENST00000514434 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms