RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
SMAD1-212ENST00000514168 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
SMAD1-212ENST00000514168 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
SMAD1-212ENST00000514168 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
SMAD1-212ENST00000514168 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
SMAD1-212ENST00000514168 MMP10P09238 476 aa15.54■□□□□ 0.08
SMAD1-212ENST00000514168 MCM10Q7L590 875 aa15.53■□□□□ 0.08
SMAD1-212ENST00000514168 IL17REQ8NFR9 667 aa15.53■□□□□ 0.08
SMAD1-212ENST00000514168 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
SMAD1-212ENST00000514168 SIPA1L3O60292 1781 aaPredicted RBP15.53■□□□□ 0.08
SMAD1-212ENST00000514168 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
SMAD1-212ENST00000514168 WWC1Q8IX03 1113 aa15.52■□□□□ 0.08
SMAD1-212ENST00000514168 TJP1Q07157 1748 aa15.51■□□□□ 0.07
SMAD1-212ENST00000514168 CEMIPQ8WUJ3 1361 aa15.51■□□□□ 0.07
SMAD1-212ENST00000514168 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
SMAD1-212ENST00000514168 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
SMAD1-212ENST00000514168 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
SMAD1-212ENST00000514168 GYS1P13807 737 aa15.5■□□□□ 0.07
SMAD1-212ENST00000514168 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
SMAD1-212ENST00000514168 TEFQ10587 303 aa15.5■□□□□ 0.07
SMAD1-212ENST00000514168 RC3H1Q5TC82 1133 aaKnown RBP15.5■□□□□ 0.07
SMAD1-212ENST00000514168 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
SMAD1-212ENST00000514168 MRC1P22897 1456 aa15.5■□□□□ 0.07
SMAD1-212ENST00000514168 SBF1O95248 1867 aa15.5■□□□□ 0.07
SMAD1-212ENST00000514168 KCNA3P22001 575 aa15.49■□□□□ 0.07
SMAD1-212ENST00000514168 CABP4P57796 275 aa15.49■□□□□ 0.07
SMAD1-212ENST00000514168 TGFB2P61812 414 aa15.49■□□□□ 0.07
SMAD1-212ENST00000514168 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
SMAD1-212ENST00000514168 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
SMAD1-212ENST00000514168 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
SMAD1-212ENST00000514168 RTCBQ9Y3I0 505 aaKnown RBP15.49■□□□□ 0.07
SMAD1-212ENST00000514168 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
SMAD1-212ENST00000514168 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
SMAD1-212ENST00000514168 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
SMAD1-212ENST00000514168 ADRA2BP18089 450 aa15.48■□□□□ 0.07
SMAD1-212ENST00000514168 SLC52A2Q9HAB3 445 aa15.48■□□□□ 0.07
SMAD1-212ENST00000514168 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
SMAD1-212ENST00000514168 DPEP1P16444 411 aa15.47■□□□□ 0.07
SMAD1-212ENST00000514168 TAF7Q15545 349 aaPredicted RBP15.47■□□□□ 0.07
SMAD1-212ENST00000514168 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
SMAD1-212ENST00000514168 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
SMAD1-212ENST00000514168 IL16Q14005 1332 aa15.46■□□□□ 0.07
SMAD1-212ENST00000514168 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
SMAD1-212ENST00000514168 DNAJC5GQ8N7S2 189 aa15.46■□□□□ 0.07
SMAD1-212ENST00000514168 KDM3BQ7LBC6 1761 aa15.46■□□□□ 0.07
SMAD1-212ENST00000514168 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
SMAD1-212ENST00000514168 BCS1LQ9Y276 419 aa15.45■□□□□ 0.06
SMAD1-212ENST00000514168 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
SMAD1-212ENST00000514168 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 GNAI1P63096 354 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 NMRK2Q9NPI5 230 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
SMAD1-212ENST00000514168 AFDNP55196 1824 aaKnown RBP15.44■□□□□ 0.06
SMAD1-212ENST00000514168 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
SMAD1-212ENST00000514168 DDR1Q08345 913 aa15.43■□□□□ 0.06
SMAD1-212ENST00000514168 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
SMAD1-212ENST00000514168 CHL1O00533 1208 aa15.42■□□□□ 0.06
SMAD1-212ENST00000514168 TOMM70O94826 608 aa15.42■□□□□ 0.06
SMAD1-212ENST00000514168 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
SMAD1-212ENST00000514168 CRKLP46109 303 aaKnown RBP15.42■□□□□ 0.06
SMAD1-212ENST00000514168 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
SMAD1-212ENST00000514168 NRXN2Q9P2S2 1712 aa15.42■□□□□ 0.06
SMAD1-212ENST00000514168 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 E9PSI1 815 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 RFC4P35249 363 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 APLP1P51693 650 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 FKBP8Q14318 412 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 ARHGAP27Q6ZUM4 889 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 MYH16Q9H6N6 1097 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 MIS18AQ9NYP9 233 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
SMAD1-212ENST00000514168 USP42Q9H9J4 1324 aaKnown RBP15.41■□□□□ 0.06
SMAD1-212ENST00000514168 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
SMAD1-212ENST00000514168 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
SMAD1-212ENST00000514168 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
SMAD1-212ENST00000514168 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
SMAD1-212ENST00000514168 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
SMAD1-212ENST00000514168 TM4SF1P30408 202 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 SLC39A6Q13433 755 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 ZNF790Q6PG37 636 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
SMAD1-212ENST00000514168 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 CCDC88AQ3V6T2 1871 aa15.39■□□□□ 0.05
SMAD1-212ENST00000514168 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
SMAD1-212ENST00000514168 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SMAD1-212ENST00000514168 POLRMTO00411 1230 aaKnown RBP15.37■□□□□ 0.05
SMAD1-212ENST00000514168 KCNQ3O43525 872 aa15.37■□□□□ 0.05
SMAD1-212ENST00000514168 TRMT2AQ8IZ69 625 aaKnown RBP15.37■□□□□ 0.05
SMAD1-212ENST00000514168 TSR2Q969E8 191 aaKnown RBP15.37■□□□□ 0.05
SMAD1-212ENST00000514168 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
SMAD1-212ENST00000514168 CHRNA5P30532 468 aa15.36■□□□□ 0.05
SMAD1-212ENST00000514168 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
SMAD1-212ENST00000514168 RBM46Q8TBY0 533 aaKnown RBP15.36■□□□□ 0.05
SMAD1-212ENST00000514168 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
SMAD1-212ENST00000514168 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms