RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 RNF181Q9P0P0 153 aa20.1■□□□□ 0.81
SGCA-210ENST00000513942 SRP68Q9UHB9 627 aaKnown RBP20.1■□□□□ 0.81
SGCA-210ENST00000513942 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
SGCA-210ENST00000513942 DDR1Q08345 913 aa20.09■□□□□ 0.81
SGCA-210ENST00000513942 FKBP8Q14318 412 aa20.09■□□□□ 0.81
SGCA-210ENST00000513942 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
SGCA-210ENST00000513942 MTHFSP49914 203 aa20.07■□□□□ 0.8
SGCA-210ENST00000513942 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
SGCA-210ENST00000513942 AFDNP55196 1824 aaKnown RBP20.06■□□□□ 0.8
SGCA-210ENST00000513942 CHRNA5P30532 468 aa20.06■□□□□ 0.8
SGCA-210ENST00000513942 JMYQ8N9B5 988 aa20.06■□□□□ 0.8
SGCA-210ENST00000513942 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
SGCA-210ENST00000513942 RRAGCQ9HB90 399 aa20.05■□□□□ 0.8
SGCA-210ENST00000513942 DLEC1Q9Y238 1755 aa20.05■□□□□ 0.8
SGCA-210ENST00000513942 VIRMAQ69YN4 1812 aaKnown RBP20.04■□□□□ 0.8
SGCA-210ENST00000513942 AEBP1Q8IUX7 1158 aa20.04■□□□□ 0.8
SGCA-210ENST00000513942 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
SGCA-210ENST00000513942 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
SGCA-210ENST00000513942 PCNTO95613 3336 aa20.04■□□□□ 0.8
SGCA-210ENST00000513942 TIAM2Q8IVF5 1701 aa20.03■□□□□ 0.8
SGCA-210ENST00000513942 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
SGCA-210ENST00000513942 COL13A1Q5TAT6 717 aaPredicted RBP20.03■□□□□ 0.8
SGCA-210ENST00000513942 NRXN2Q9P2S2 1712 aa20.02■□□□□ 0.8
SGCA-210ENST00000513942 SMC1BQ8NDV3 1235 aa20.02■□□□□ 0.8
SGCA-210ENST00000513942 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
SGCA-210ENST00000513942 CCDC88AQ3V6T2 1871 aa20.02■□□□□ 0.8
SGCA-210ENST00000513942 RASSF7Q02833 373 aa20.01■□□□□ 0.79
SGCA-210ENST00000513942 INTS5Q6P9B9 1019 aaKnown RBP20.01■□□□□ 0.79
SGCA-210ENST00000513942 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
SGCA-210ENST00000513942 ZPR1O75312 459 aa20■□□□□ 0.79
SGCA-210ENST00000513942 TM4SF1P30408 202 aa20■□□□□ 0.79
SGCA-210ENST00000513942 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
SGCA-210ENST00000513942 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
SGCA-210ENST00000513942 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
SGCA-210ENST00000513942 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
SGCA-210ENST00000513942 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
SGCA-210ENST00000513942 MRC1P22897 1456 aa19.98■□□□□ 0.79
SGCA-210ENST00000513942 COL15A1P39059 1388 aa19.96■□□□□ 0.79
SGCA-210ENST00000513942 CAPN15O75808 1086 aa19.96■□□□□ 0.79
SGCA-210ENST00000513942 TNS4Q8IZW8 715 aa19.96■□□□□ 0.79
SGCA-210ENST00000513942 LMNB1P20700 586 aa19.95■□□□□ 0.78
SGCA-210ENST00000513942 HNRNPUQ00839 825 aaKnown RBP eCLIP19.95■□□□□ 0.78
SGCA-210ENST00000513942 NFIXQ14938 502 aa19.95■□□□□ 0.78
SGCA-210ENST00000513942 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
SGCA-210ENST00000513942 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
SGCA-210ENST00000513942 NARFQ9UHQ1 456 aa19.94■□□□□ 0.78
SGCA-210ENST00000513942 GLTPD2A6NH11 291 aa19.93■□□□□ 0.78
SGCA-210ENST00000513942 CYP19A1P11511 503 aaPredicted RBP19.93■□□□□ 0.78
SGCA-210ENST00000513942 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
SGCA-210ENST00000513942 PRELPP51888 382 aa19.93■□□□□ 0.78
SGCA-210ENST00000513942 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
SGCA-210ENST00000513942 IL13P35225 146 aa19.92■□□□□ 0.78
SGCA-210ENST00000513942 ZBTB1Q9Y2K1 713 aa19.92■□□□□ 0.78
SGCA-210ENST00000513942 CARMIL3Q8ND23 1372 aa19.92■□□□□ 0.78
SGCA-210ENST00000513942 ANKRD31Q8N7Z5 1873 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 SERPINB2P05120 415 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 SLC39A6Q13433 755 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 TTLL6Q8N841 843 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 BCL2L12Q9HB09 334 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
SGCA-210ENST00000513942 DICER1Q9UPY3 1922 aaKnown RBP19.91■□□□□ 0.78
SGCA-210ENST00000513942 C2CD5Q86YS7 1000 aa19.9■□□□□ 0.78
SGCA-210ENST00000513942 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
SGCA-210ENST00000513942 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
SGCA-210ENST00000513942 HSPA1AP0DMV8 641 aaKnown RBP19.89■□□□□ 0.77
SGCA-210ENST00000513942 HSPA1BP0DMV9 641 aaKnown RBP19.89■□□□□ 0.77
SGCA-210ENST00000513942 COL11A2P13942 1736 aaPredicted RBP19.89■□□□□ 0.77
SGCA-210ENST00000513942 SCN7AQ01118 1682 aa19.89■□□□□ 0.77
SGCA-210ENST00000513942 ZBED9Q6R2W3 1325 aa19.89■□□□□ 0.77
SGCA-210ENST00000513942 FER1L6Q2WGJ9 1857 aa19.88■□□□□ 0.77
SGCA-210ENST00000513942 NFKBIEO00221 500 aa19.88■□□□□ 0.77
SGCA-210ENST00000513942 H0YIN7 160 aa19.87■□□□□ 0.77
SGCA-210ENST00000513942 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
SGCA-210ENST00000513942 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
SGCA-210ENST00000513942 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
SGCA-210ENST00000513942 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
SGCA-210ENST00000513942 BICDL1Q6ZP65 573 aa19.85■□□□□ 0.77
SGCA-210ENST00000513942 COL3A1P02461 1466 aaPredicted RBP19.85■□□□□ 0.77
SGCA-210ENST00000513942 DIAPH1O60610 1272 aaKnown RBP19.84■□□□□ 0.77
SGCA-210ENST00000513942 HMOX1P09601 288 aa19.84■□□□□ 0.77
SGCA-210ENST00000513942 POTECB2RU33 542 aa19.83■□□□□ 0.77
SGCA-210ENST00000513942 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.77
SGCA-210ENST00000513942 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
SGCA-210ENST00000513942 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
SGCA-210ENST00000513942 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
SGCA-210ENST00000513942 ARFGEF2Q9Y6D5 1785 aa19.82■□□□□ 0.76
SGCA-210ENST00000513942 A0A087WZG4 1122 aa19.81■□□□□ 0.76
SGCA-210ENST00000513942 EIF5P55010 431 aaKnown RBP19.81■□□□□ 0.76
SGCA-210ENST00000513942 ERFEQ4G0M1 354 aa19.81■□□□□ 0.76
SGCA-210ENST00000513942 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
SGCA-210ENST00000513942 ZNF622Q969S3 477 aaKnown RBP eCLIP19.81■□□□□ 0.76
SGCA-210ENST00000513942 ZNF219Q9P2Y4 722 aaPredicted RBP19.81■□□□□ 0.76
SGCA-210ENST00000513942 SIPA1L3O60292 1781 aaPredicted RBP19.8■□□□□ 0.76
SGCA-210ENST00000513942 C21orf2O43822 256 aa19.8■□□□□ 0.76
SGCA-210ENST00000513942 STARD3NLO95772 234 aa19.8■□□□□ 0.76
SGCA-210ENST00000513942 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
SGCA-210ENST00000513942 PDZRN3Q9UPQ7 1066 aa19.8■□□□□ 0.76
SGCA-210ENST00000513942 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
SGCA-210ENST00000513942 PDE6BP35913 854 aa19.79■□□□□ 0.76
SGCA-210ENST00000513942 BRIP1Q9BX63 1249 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms