RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 CTSOP43234 321 aaPredicted RBP7.68□□□□□ -1.18
CLDND1-228ENST00000513873 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
CLDND1-228ENST00000513873 GAS6Q14393 721 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 KDF1Q8NAX2 398 aaPredicted RBP7.68□□□□□ -1.18
CLDND1-228ENST00000513873 TPCN2Q8NHX9 752 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 NSFL1CQ9UNZ2 370 aaKnown RBP7.68□□□□□ -1.18
CLDND1-228ENST00000513873 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
CLDND1-228ENST00000513873 IGF1RP08069 1367 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 TLR1Q15399 786 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 CDCA8Q53HL2 280 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 TMEM214Q6NUQ4 689 aaKnown RBP7.67□□□□□ -1.18
CLDND1-228ENST00000513873 GMCL1Q96IK5 515 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 ZNF594Q96JF6 807 aaPredicted RBP7.67□□□□□ -1.18
CLDND1-228ENST00000513873 ZSCAN10Q96SZ4 725 aaPredicted RBP7.67□□□□□ -1.18
CLDND1-228ENST00000513873 ARID3AQ99856 593 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 RIMBP3CA6NJZ7 1639 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 RIMBP3BA6NNM3 1639 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 RIMBP3Q9UFD9 1639 aa7.67□□□□□ -1.18
CLDND1-228ENST00000513873 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 IL2RAP01589 272 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 CENPCQ03188 943 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 KANK4Q5T7N3 995 aaPredicted RBP7.66□□□□□ -1.18
CLDND1-228ENST00000513873 PRICKLE2Q7Z3G6 844 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 MKL2Q9ULH7 1088 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 HMGXB3Q12766 1538 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 SMARCA2P51531 1590 aa7.66□□□□□ -1.18
CLDND1-228ENST00000513873 FAM196BA6NMK8 535 aa7.65□□□□□ -1.18
CLDND1-228ENST00000513873 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
CLDND1-228ENST00000513873 CLDN10P78369 228 aa7.65□□□□□ -1.18
CLDND1-228ENST00000513873 ZMYM1Q5SVZ6 1142 aa7.65□□□□□ -1.18
CLDND1-228ENST00000513873 RNF217Q8TC41 542 aa7.65□□□□□ -1.18
CLDND1-228ENST00000513873 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
CLDND1-228ENST00000513873 PDS5BQ9NTI5 1447 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
CLDND1-228ENST00000513873 SCNN1DP51172 638 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 SMTNP53814 917 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 SEC13P55735 322 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLDND1-228ENST00000513873 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
CLDND1-228ENST00000513873 ATAD2BQ9ULI0 1458 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.63□□□□□ -1.19
CLDND1-228ENST00000513873 SCO2A0A1W2PP80 73 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L10C9JJH3 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L12C9JPN9 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L21D6R901 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 PPP1R15AO75807 674 aaPredicted RBP7.63□□□□□ -1.19
CLDND1-228ENST00000513873 STAU1O95793 577 aaKnown RBP7.63□□□□□ -1.19
CLDND1-228ENST00000513873 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 FOXD4L5Q5VV16 416 aaPredicted RBP7.63□□□□□ -1.19
CLDND1-228ENST00000513873 TAS1R3Q7RTX0 852 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 SIX5Q8N196 739 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 NBPF15Q8N660 670 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 TRERF1Q96PN7 1200 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 HINFPQ9BQA5 517 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 GRIP2Q9C0E4 1043 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 ZNF358Q9NW07 568 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
CLDND1-228ENST00000513873 SENP3-EIF4A1A0A087X0R7 540 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 A6NJY4 79 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 POU4F2Q12837 409 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 DPYDQ12882 1025 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 PTK7Q13308 1070 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 CRTC2Q53ET0 693 aaPredicted RBP7.62□□□□□ -1.19
CLDND1-228ENST00000513873 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
CLDND1-228ENST00000513873 SFI1A8K8P3 1242 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 M0R2N6 131 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 PIK3R2O00459 728 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 ACDQ96AP0 544 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
CLDND1-228ENST00000513873 KIAA1024Q9UPX6 916 aa7.61□□□□□ -1.19
CLDND1-228ENST00000513873 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 CDK2AP1O14519 115 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 RHOQP17081 205 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 WDR44Q5JSH3 913 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
CLDND1-228ENST00000513873 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
CLDND1-228ENST00000513873 TRIM22Q8IYM9 498 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 RHBDD1Q8TEB9 315 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
CLDND1-228ENST00000513873 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
CLDND1-228ENST00000513873 HRH3Q9Y5N1 445 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms