RNA–Protein interactions for RNA: ENST00000513800.5

DCUN1D4-222, Transcript of defective in cullin neddylation 1 domain containing 4, human

TSL 2

Gene DCUN1D4, Length 949 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCUN1D4-222	ENST00000513800	ZBTB1	Q9Y2K1	713 aa		33.29	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	COL15A1	P39059	1388 aa		33.28	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	SRP68	Q9UHB9	627 aa	Known RBP	33.27	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	NFE2L2	Q16236	605 aa		33.26	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	GOLGB1	Q14789	3259 aa	Known RBP	33.26	■■■□□ 2.91
DCUN1D4-222	ENST00000513800		A0A087WZG4	1122 aa		33.25	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	CANX	P27824	592 aa	Known RBP	33.25	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	DCTN1	Q14203	1278 aa		33.25	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	TAF7	Q15545	349 aa	Predicted RBP	33.24	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	NPM2	Q86SE8	214 aa	Known RBP	33.24	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	NARF	Q9UHQ1	456 aa		33.24	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	FKBP8	Q14318	412 aa		33.23	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	CHD4	Q14839	1912 aa		33.22	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	TGFB2	P61812	414 aa		33.22	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	USPL1	Q5W0Q7	1092 aa		33.22	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	PNISR	Q8TF01	805 aa	Known RBP	33.22	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	C10orf71	Q711Q0	1435 aa		33.2	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	YBX3	P16989	372 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
DCUN1D4-222	ENST00000513800	KCNQ3	O43525	872 aa		33.19	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	SNRPA1	P09661	255 aa	Known RBP	33.19	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	EIF5	P55010	431 aa	Known RBP	33.19	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	WDR43	Q15061	677 aa	Known RBP eCLIP	33.19	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	IL6ST	P40189	918 aa	Predicted RBP	33.18	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.18	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	KIF13B	Q9NQT8	1826 aa		33.16	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	LMOD3	Q0VAK6	560 aa		33.15	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	DLG5	Q8TDM6	1919 aa		33.15	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.15	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	TM4SF1	P30408	202 aa		33.14	■■■□□ 2.9
DCUN1D4-222	ENST00000513800	PXDNL	A1KZ92	1463 aa		33.13	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	DDR1	Q08345	913 aa		33.13	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	POLRMT	O00411	1230 aa	Known RBP	33.12	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	A1BG	P04217	495 aa		33.11	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	USP16	Q9Y5T5	823 aa		33.11	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	RIPK4	P57078	832 aa		33.1	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	NFIX	Q14938	502 aa		33.09	■■■□□ 2.89
DCUN1D4-222	ENST00000513800	MIS18A	Q9NYP9	233 aa		33.08	■■■□□ 2.89
DCUN1D4-222	ENST00000513800		A0A0G2JLW4	131 aa		33.07	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	TMPO	P42166	694 aa	Known RBP	33.07	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	RUNDC1	Q96C34	613 aa		33.07	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	BCL2L12	Q9HB09	334 aa		33.07	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.06	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	THUMPD2	Q9BTF0	503 aa	Known RBP	33.06	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	WWC3	Q9ULE0	1092 aa		33.06	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	DPEP1	P16444	411 aa		33.05	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	TBC1D2B	Q9UPU7	963 aa		33.05	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	PRAMEF22	A3QJZ6	481 aa		33.04	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	SERPINB2	P05120	415 aa		33.03	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	DZIP3	Q86Y13	1208 aa	Known RBP	33.03	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	SCN7A	Q01118	1682 aa		33.03	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	KDM3B	Q7LBC6	1761 aa		33.03	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	KIAA1551	Q9HCM1	1747 aa		33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	CCDC146	Q8IYE0	955 aa		33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	BABAM1	Q9NWV8	329 aa		33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	BCS1L	Q9Y276	419 aa		33.02	■■■□□ 2.88
DCUN1D4-222	ENST00000513800	EIF4A1	P60842	406 aa	Known RBP	33.01	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	BICDL1	Q6ZP65	573 aa		33.01	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	PIM2	Q9P1W9	311 aa		33.01	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	TSPYL4	Q9UJ04	414 aa		33.01	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	ADAMTS8	Q9UP79	889 aa		33.01	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	ZNF652	Q9Y2D9	606 aa		33	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	CARMIL3	Q8ND23	1372 aa		32.99	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	GIGYF1	O75420	1035 aa	Predicted RBP	32.99	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	CAMTA2	O94983	1202 aa		32.99	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	TBC1D9B	Q66K14	1250 aa		32.98	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	LAMB4	A4D0S4	1761 aa		32.98	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	PIP4K2A	P48426	406 aa	Predicted RBP	32.97	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	NEUROD2	Q15784	382 aa		32.97	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	CLEC4G	Q6UXB4	293 aa		32.97	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	SETDB2	Q96T68	719 aa		32.97	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	NRXN2	Q9P2S2	1712 aa		32.97	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	RGL2	O15211	777 aa		32.96	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	RRP7A	Q9Y3A4	280 aa	Known RBP	32.96	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	KCNA3	P22001	575 aa		32.95	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	DALRD3	Q5D0E6	543 aa	Known RBP	32.95	■■■□□ 2.87
DCUN1D4-222	ENST00000513800	AFDN	P55196	1824 aa	Known RBP	32.95	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	NPHP1	O15259	732 aa		32.94	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	NBPF26	B4DH59	902 aa		32.93	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	NBPF10	Q6P3W6	841 aa	Known RBP	32.93	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	NBPF15	Q8N660	670 aa		32.93	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	BCOR	Q6W2J9	1755 aa		32.92	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	CHRNA5	P30532	468 aa		32.92	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	PDZRN3	Q9UPQ7	1066 aa		32.92	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	BRCA1	P38398	1863 aa	Known RBP	32.91	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	ERBB4	Q15303	1308 aa		32.9	■■■□□ 2.86
DCUN1D4-222	ENST00000513800	CNBD1	Q8NA66	436 aa		32.89	■■■□□ 2.86
DCUN1D4-222	ENST00000513800		H0YIN7	160 aa		32.88	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	PDE6B	P35913	854 aa		32.88	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	ST5	P78524	1137 aa		32.88	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	ARHGAP27	Q6ZUM4	889 aa		32.88	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	BRIP1	Q9BX63	1249 aa		32.88	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	TRIM35	Q9UPQ4	493 aa		32.87	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	ANP32C	O43423	234 aa		32.86	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	PRR5L	Q6MZQ0	368 aa		32.86	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	C2CD5	Q86YS7	1000 aa		32.86	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	ARFGEF1	Q9Y6D6	1849 aa		32.86	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	KIF6	Q6ZMV9	814 aa		32.85	■■■□□ 2.85
DCUN1D4-222	ENST00000513800	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.84	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms