RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 GTF2F1P35269 517 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLCN3-209ENST00000513761 FILIP1LQ4L180 1135 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 F13A1P00488 732 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
CLCN3-209ENST00000513761 PKP1Q13835 747 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 PPFIBP1Q86W92 1011 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 DACT1Q9NYF0 836 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 H0YHG0 523 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 CBFA2T2O43439 604 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 ERCC4Q92889 916 aaPredicted RBP9.1□□□□□ -0.95
CLCN3-209ENST00000513761 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 INSRP06213 1382 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
CLCN3-209ENST00000513761 FSIP1Q8NA03 581 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 FAM200AQ8TCP9 573 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 KIF2AO00139 706 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-209ENST00000513761 GTF2E1P29083 439 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-209ENST00000513761 FAM69CQ0P6D2 419 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 TMEM63CQ9P1W3 806 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-209ENST00000513761 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 TMC6Q7Z403 805 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 DNAJC25Q9H1X3 360 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 EIF2AK4Q9P2K8 1649 aaKnown RBP9.09□□□□□ -0.95
CLCN3-209ENST00000513761 GCC2Q8IWJ2 1684 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 ANAPC15P60006 121 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 ANXA1P04083 346 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 POLKQ9UBT6 870 aa9.09□□□□□ -0.95
CLCN3-209ENST00000513761 AK2P54819 239 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 ECHDC1Q9NTX5 307 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 CPA1P15085 419 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 DHX8Q14562 1220 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 DNAAF4Q8WXU2 420 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC47Q96A33 483 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 PAXBP1Q9Y5B6 917 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 FAM193AP78312 1265 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 VPS53Q5VIR6 699 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 CCAR1Q8IX12 1150 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 SKILP12757 684 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 LUZP1Q86V48 1076 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 STX1AQ16623 288 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 NOL10Q9BSC4 688 aaKnown RBP9.08□□□□□ -0.96
CLCN3-209ENST00000513761 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
CLCN3-209ENST00000513761 TYRO3Q06418 890 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 KDM5CP41229 1560 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-209ENST00000513761 ERLIN1O75477 346 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 CALCOCO1Q9P1Z2 691 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 NPC1L1Q9UHC9 1359 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 SMAP1Q8IYB5 467 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-209ENST00000513761 KRT222Q8N1A0 295 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 NEMFO60524 1076 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
CLCN3-209ENST00000513761 CHMLP26374 656 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 EVI5LQ96CN4 794 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 LRRC2Q9BYS8 371 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 MAGI2Q86UL8 1455 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 PI4KAP2A4QPH2 592 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 PI4KAP1Q8N8J0 262 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-209ENST00000513761 PPP1R9BQ96SB3 815 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 ADGRL1O94910 1474 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 CTAGE5O15320 804 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 TOP1P11387 765 aaKnown RBP9.07□□□□□ -0.96
CLCN3-209ENST00000513761 SYT1P21579 422 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 USP19O94966 1318 aa9.07□□□□□ -0.96
CLCN3-209ENST00000513761 XBP1P17861 261 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 CCDC85AQ96PX6 553 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 U2AF2P26368 475 aaKnown RBP eCLIP9.06□□□□□ -0.967e-9■■■■□ 20.9
CLCN3-209ENST00000513761 INTS4Q96HW7 963 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 SART3Q15020 963 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 ZBTB9Q96C00 473 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 SYTL4Q96C24 671 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 BRMS1Q9HCU9 246 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 POLR3DP05423 398 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-209ENST00000513761 CASQ1P31415 396 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 C8orf76Q96K31 380 aa9.06□□□□□ -0.96
CLCN3-209ENST00000513761 ZSWIM4Q9H7M6 989 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms