RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
FOXD1-201ENST00000513595 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
FOXD1-201ENST00000513595 KCNA3P22001 575 aa17.66■□□□□ 0.42
FOXD1-201ENST00000513595 HOXC9P31274 260 aa17.66■□□□□ 0.42
FOXD1-201ENST00000513595 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
FOXD1-201ENST00000513595 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
FOXD1-201ENST00000513595 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
FOXD1-201ENST00000513595 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
FOXD1-201ENST00000513595 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
FOXD1-201ENST00000513595 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
FOXD1-201ENST00000513595 GNPATO15228 680 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 CCDC87Q9NVE4 849 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 PDE4DIPQ5VU43 2346 aa17.64■□□□□ 0.41
FOXD1-201ENST00000513595 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 SIK1P57059 783 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
FOXD1-201ENST00000513595 AMPHP49418 695 aa17.62■□□□□ 0.41
FOXD1-201ENST00000513595 PIGBQ92521 554 aa17.62■□□□□ 0.41
FOXD1-201ENST00000513595 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
FOXD1-201ENST00000513595 TATP17735 454 aaPredicted RBP17.61■□□□□ 0.41
FOXD1-201ENST00000513595 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
FOXD1-201ENST00000513595 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
FOXD1-201ENST00000513595 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
FOXD1-201ENST00000513595 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
FOXD1-201ENST00000513595 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
FOXD1-201ENST00000513595 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
FOXD1-201ENST00000513595 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
FOXD1-201ENST00000513595 TNRC18O15417 2968 aaPredicted RBP17.6■□□□□ 0.41
FOXD1-201ENST00000513595 CYP27B1O15528 508 aa17.59■□□□□ 0.41
FOXD1-201ENST00000513595 HSPA8P11142 646 aaKnown RBP17.59■□□□□ 0.41
FOXD1-201ENST00000513595 ITPK1Q13572 414 aa17.59■□□□□ 0.41
FOXD1-201ENST00000513595 TRAPPC3LQ5T215 181 aa17.59■□□□□ 0.41
FOXD1-201ENST00000513595 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
FOXD1-201ENST00000513595 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
FOXD1-201ENST00000513595 GLTPD2A6NH11 291 aa17.58■□□□□ 0.4
FOXD1-201ENST00000513595 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
FOXD1-201ENST00000513595 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
FOXD1-201ENST00000513595 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
FOXD1-201ENST00000513595 ARFGEF1Q9Y6D6 1849 aa17.58■□□□□ 0.4
FOXD1-201ENST00000513595 DIAPH1O60610 1272 aaKnown RBP17.57■□□□□ 0.4
FOXD1-201ENST00000513595 VEGFBP49765 207 aa17.57■□□□□ 0.4
FOXD1-201ENST00000513595 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
FOXD1-201ENST00000513595 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
FOXD1-201ENST00000513595 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
FOXD1-201ENST00000513595 ATP6V1AP38606 617 aa17.56■□□□□ 0.4
FOXD1-201ENST00000513595 RASSF7Q02833 373 aa17.56■□□□□ 0.4
FOXD1-201ENST00000513595 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
FOXD1-201ENST00000513595 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
FOXD1-201ENST00000513595 RTL1A6NKG5 1358 aa17.55■□□□□ 0.4
FOXD1-201ENST00000513595 FLT4P35916 1363 aa17.55■□□□□ 0.4
FOXD1-201ENST00000513595 GYS1P13807 737 aa17.55■□□□□ 0.4
FOXD1-201ENST00000513595 FBLN1P23142 703 aa17.55■□□□□ 0.4
FOXD1-201ENST00000513595 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
FOXD1-201ENST00000513595 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
FOXD1-201ENST00000513595 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
FOXD1-201ENST00000513595 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
FOXD1-201ENST00000513595 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
FOXD1-201ENST00000513595 POTEIP0CG38 1075 aa17.52■□□□□ 0.4
FOXD1-201ENST00000513595 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
FOXD1-201ENST00000513595 RGPD2P0DJD1 1756 aa17.52■□□□□ 0.4
FOXD1-201ENST00000513595 C4AP0C0L4 1744 aa17.52■□□□□ 0.39
FOXD1-201ENST00000513595 SBF1O95248 1867 aa17.52■□□□□ 0.39
FOXD1-201ENST00000513595 POTECB2RU33 542 aa17.51■□□□□ 0.39
FOXD1-201ENST00000513595 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
FOXD1-201ENST00000513595 LMNB1P20700 586 aa17.51■□□□□ 0.39
FOXD1-201ENST00000513595 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
FOXD1-201ENST00000513595 IL13P35225 146 aa17.5■□□□□ 0.39
FOXD1-201ENST00000513595 RFC4P35249 363 aa17.5■□□□□ 0.39
FOXD1-201ENST00000513595 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
FOXD1-201ENST00000513595 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
FOXD1-201ENST00000513595 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
FOXD1-201ENST00000513595 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
FOXD1-201ENST00000513595 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
FOXD1-201ENST00000513595 CHRNA5P30532 468 aa17.49■□□□□ 0.39
FOXD1-201ENST00000513595 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
FOXD1-201ENST00000513595 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
FOXD1-201ENST00000513595 ITGB4P16144 1822 aa17.48■□□□□ 0.39
FOXD1-201ENST00000513595 RPS6KA4O75676 772 aa17.47■□□□□ 0.39
FOXD1-201ENST00000513595 POTEJP0CG39 1038 aa17.47■□□□□ 0.39
FOXD1-201ENST00000513595 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
FOXD1-201ENST00000513595 EIF4A2Q14240 407 aaKnown RBP17.47■□□□□ 0.39
FOXD1-201ENST00000513595 ZNF579Q8NAF0 562 aaKnown RBP17.47■□□□□ 0.39
FOXD1-201ENST00000513595 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
FOXD1-201ENST00000513595 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
FOXD1-201ENST00000513595 TIAM2Q8IVF5 1701 aa17.45■□□□□ 0.38
FOXD1-201ENST00000513595 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
FOXD1-201ENST00000513595 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
FOXD1-201ENST00000513595 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
FOXD1-201ENST00000513595 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
FOXD1-201ENST00000513595 DDR1Q08345 913 aa17.44■□□□□ 0.38
FOXD1-201ENST00000513595 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
FOXD1-201ENST00000513595 KDRP35968 1356 aa17.43■□□□□ 0.38
FOXD1-201ENST00000513595 NEFMP07197 916 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms