RNA–Protein interactions for RNA: ENST00000513462.1

NIFKP2-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2, humanhuman

BASIC

Gene NIFKP2, Length 856 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP2-201ENST00000513462 VPS72Q15906 364 aa13.3□□□□□ -0.28
NIFKP2-201ENST00000513462 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
NIFKP2-201ENST00000513462 ABCC4O15439 1325 aa13.3□□□□□ -0.28
NIFKP2-201ENST00000513462 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
NIFKP2-201ENST00000513462 PAPPAQ13219 1627 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 TMEM57Q8N5G2 664 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 TOGARAM1Q9Y4F4 1720 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
NIFKP2-201ENST00000513462 ITGB4P16144 1822 aa13.28□□□□□ -0.28
NIFKP2-201ENST00000513462 DDB1Q16531 1140 aa13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 ITPRIPQ8IWB1 547 aa13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 RGS12O14924 1447 aa13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 C5P01031 1676 aa13.27□□□□□ -0.29
NIFKP2-201ENST00000513462 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 USP21Q9UK80 565 aa13.26□□□□□ -0.29
NIFKP2-201ENST00000513462 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 FLIIQ13045 1269 aa13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 CENPQQ7L2Z9 268 aaPredicted RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 G2E3Q7L622 706 aa13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 ZNF496Q96IT1 587 aaPredicted RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 TMOD3Q9NYL9 352 aa13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
NIFKP2-201ENST00000513462 ZBTB7BO15156 539 aaPredicted RBP13.24□□□□□ -0.29
NIFKP2-201ENST00000513462 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
NIFKP2-201ENST00000513462 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
NIFKP2-201ENST00000513462 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 GLI3P10071 1580 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
NIFKP2-201ENST00000513462 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
NIFKP2-201ENST00000513462 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
NIFKP2-201ENST00000513462 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
NIFKP2-201ENST00000513462 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
NIFKP2-201ENST00000513462 BCL9O00512 1426 aa13.22□□□□□ -0.29
NIFKP2-201ENST00000513462 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 PIGBQ92521 554 aa13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 PCDHB15Q9Y5E8 787 aa13.21□□□□□ -0.29
NIFKP2-201ENST00000513462 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.3
NIFKP2-201ENST00000513462 AFF2P51816 1311 aa13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 PDIA6Q15084 440 aa13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 ATRNO75882 1429 aa13.2□□□□□ -0.3
NIFKP2-201ENST00000513462 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
NIFKP2-201ENST00000513462 F6X3S4 739 aa13.18□□□□□ -0.3
NIFKP2-201ENST00000513462 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
NIFKP2-201ENST00000513462 IGHDP01880 384 aa13.18□□□□□ -0.3
NIFKP2-201ENST00000513462 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
NIFKP2-201ENST00000513462 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 KSR2Q6VAB6 950 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
NIFKP2-201ENST00000513462 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 ANXA1P04083 346 aa13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
NIFKP2-201ENST00000513462 GNAI3P08754 354 aa13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 ADCY9O60503 1353 aa13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
NIFKP2-201ENST00000513462 CICQ96RK0 1608 aaPredicted RBP13.14□□□□□ -0.31
NIFKP2-201ENST00000513462 MYL6BP14649 208 aa13.14□□□□□ -0.31
NIFKP2-201ENST00000513462 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
NIFKP2-201ENST00000513462 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
NIFKP2-201ENST00000513462 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
NIFKP2-201ENST00000513462 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms