RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	PHF14	O94880	888 aa		11.42	□□□□□ -0.58
ACSF2-223	ENST00000513101	EIF4A1	P60842	406 aa	Known RBP	11.42	□□□□□ -0.58
ACSF2-223	ENST00000513101	CALD1	Q05682	793 aa	Known RBP	11.42	□□□□□ -0.58
ACSF2-223	ENST00000513101	TRMT2A	Q8IZ69	625 aa	Known RBP	11.42	□□□□□ -0.58
ACSF2-223	ENST00000513101	C5	P01031	1676 aa		11.42	□□□□□ -0.58
ACSF2-223	ENST00000513101	CASZ1	Q86V15	1759 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	CHL1	O00533	1208 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	YY1	P25490	414 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	SMIM5	Q71RC9	77 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	TSPYL4	Q9UJ04	414 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	USP16	Q9Y5T5	823 aa		11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	CIC	Q96RK0	1608 aa	Predicted RBP	11.41	□□□□□ -0.58
ACSF2-223	ENST00000513101	SOS1	Q07889	1333 aa	Predicted RBP	11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	TAF1L	Q8IZX4	1826 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	GIGYF1	O75420	1035 aa	Predicted RBP	11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	POLD1	P28340	1107 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	RFC4	P35249	363 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	NLGN1	Q8N2Q7	840 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	CFAP44	Q96MT7	982 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	ZBTB1	Q9Y2K1	713 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	SIPA1L3	O60292	1781 aa	Predicted RBP	11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	QSER1	Q2KHR3	1735 aa		11.4	□□□□□ -0.58
ACSF2-223	ENST00000513101	ZNF853	P0CG23	659 aa		11.39	□□□□□ -0.59
ACSF2-223	ENST00000513101	IL6ST	P40189	918 aa	Predicted RBP	11.39	□□□□□ -0.59
ACSF2-223	ENST00000513101	EIF5	P55010	431 aa	Known RBP	11.39	□□□□□ -0.59
ACSF2-223	ENST00000513101	ARX	Q96QS3	562 aa		11.39	□□□□□ -0.59
ACSF2-223	ENST00000513101	RNF123	Q5XPI4	1314 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101		A0A087WZG4	1122 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	PRAMEF22	A3QJZ6	481 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	A1BG	P04217	495 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	GYS1	P13807	737 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	CANX	P27824	592 aa	Known RBP	11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	GNAI1	P63096	354 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	WDR63	Q8IWG1	891 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	WWC1	Q8IX03	1113 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	IFT57	Q9NWB7	429 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	UBR2	Q8IWV8	1755 aa		11.38	□□□□□ -0.59
ACSF2-223	ENST00000513101	ZPR1	O75312	459 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	KCNA4	P22459	653 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	GOLGA2	Q08379	1002 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	MSL1	Q68DK7	614 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	NARF	Q9UHQ1	456 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	LAS1L	Q9Y4W2	734 aa	Known RBP	11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	COL5A3	P25940	1745 aa	Predicted RBP	11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	TJP1	Q07157	1748 aa		11.37	□□□□□ -0.59
ACSF2-223	ENST00000513101	IL16	Q14005	1332 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	USP42	Q9H9J4	1324 aa	Known RBP	11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101		E9PSI1	815 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	SLFN5	Q08AF3	891 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	DUSP27	Q5VZP5	1158 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	NPM2	Q86SE8	214 aa	Known RBP	11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	COL15A1	P39059	1388 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	DLG5	Q8TDM6	1919 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	UBR3	Q6ZT12	1888 aa		11.36	□□□□□ -0.59
ACSF2-223	ENST00000513101	ERBB4	Q15303	1308 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	VIRMA	Q69YN4	1812 aa	Known RBP	11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	NBPF26	B4DH59	902 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	HOXB7	P09629	217 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	NBPF10	Q6P3W6	841 aa	Known RBP	11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	NBPF15	Q8N660	670 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	MBIP	Q9NS73	344 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	SRP68	Q9UHB9	627 aa	Known RBP	11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	TUBGCP6	Q96RT7	1819 aa		11.35	□□□□□ -0.59
ACSF2-223	ENST00000513101	MYH14	Q7Z406	1995 aa	Known RBP	11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	RGL2	O15211	777 aa		11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	MMP10	P09238	476 aa		11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	TM4SF1	P30408	202 aa		11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	USPL1	Q5W0Q7	1092 aa		11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	SYT17	Q9BSW7	474 aa		11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.34	□□□□□ -0.59
ACSF2-223	ENST00000513101	FKBP8	Q14318	412 aa		11.33	□□□□□ -0.6
ACSF2-223	ENST00000513101	CDCA7L	Q96GN5	454 aa		11.33	□□□□□ -0.6
ACSF2-223	ENST00000513101	BCL2L12	Q9HB09	334 aa		11.33	□□□□□ -0.6
ACSF2-223	ENST00000513101	CD2AP	Q9Y5K6	639 aa		11.33	□□□□□ -0.6
ACSF2-223	ENST00000513101	KDM3B	Q7LBC6	1761 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	CAMTA2	O94983	1202 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	PIP4K2A	P48426	406 aa	Predicted RBP	11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	CLEC4G	Q6UXB4	293 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	DZIP3	Q86Y13	1208 aa	Known RBP	11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	CHMP4A	Q9BY43	222 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	TBC1D2B	Q9UPU7	963 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	PARP3	Q9Y6F1	533 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	COL24A1	Q17RW2	1714 aa		11.32	□□□□□ -0.6
ACSF2-223	ENST00000513101	EIF2S2	P20042	333 aa	Known RBP	11.31	□□□□□ -0.6
ACSF2-223	ENST00000513101	PDIA6	Q15084	440 aa		11.31	□□□□□ -0.6
ACSF2-223	ENST00000513101	KRT24	Q2M2I5	525 aa		11.31	□□□□□ -0.6
ACSF2-223	ENST00000513101	SALL2	Q9Y467	1007 aa	Predicted RBP	11.31	□□□□□ -0.6
ACSF2-223	ENST00000513101	SENP3-EIF4A1	A0A087X0R7	540 aa		11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	ERVV-1	B6SEH8	477 aa		11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	NFIX	Q14938	502 aa		11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	ERICH6B	Q5W0A0	696 aa		11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	LRP10	Q7Z4F1	713 aa		11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
ACSF2-223	ENST00000513101	POLRMT	O00411	1230 aa	Known RBP	11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	CT47B1	P0C2W7	299 aa	Predicted RBP	11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	MYL6B	P14649	208 aa		11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	DDR1	Q08345	913 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms