RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
CPNE4-210ENST00000512332 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
CPNE4-210ENST00000512332 NEK4P51957 841 aa11.27□□□□□ -0.61
CPNE4-210ENST00000512332 CUL4AQ13619 759 aa11.27□□□□□ -0.61
CPNE4-210ENST00000512332 PI4KAP1Q8N8J0 262 aa11.27□□□□□ -0.61
CPNE4-210ENST00000512332 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
CPNE4-210ENST00000512332 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
CPNE4-210ENST00000512332 CAMTA1Q9Y6Y1 1673 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 C1orf141Q5JVX7 400 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 ADAMTSL3P82987 1691 aa11.26□□□□□ -0.61
CPNE4-210ENST00000512332 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-210ENST00000512332 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-210ENST00000512332 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
CPNE4-210ENST00000512332 ADCY9O60503 1353 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 KCNQ3O43525 872 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 TMX3Q96JJ7 454 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
CPNE4-210ENST00000512332 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
CPNE4-210ENST00000512332 TTC41PQ6P2S7 1318 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 HSPA4P34932 840 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 GAS2L3Q86XJ1 694 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
CPNE4-210ENST00000512332 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
CPNE4-210ENST00000512332 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 LMBRD1Q9NUN5 540 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-210ENST00000512332 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
CPNE4-210ENST00000512332 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
CPNE4-210ENST00000512332 ZNF445P59923 1031 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 UTYO14607 1347 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 SGSM2O43147 1006 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 PKP1Q13835 747 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 MCTP1Q6DN14 999 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
CPNE4-210ENST00000512332 PXDNQ92626 1479 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 ERC1Q8IUD2 1116 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 SIPA1L3O60292 1781 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-210ENST00000512332 RAD50Q92878 1312 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 CRYBG1Q9Y4K1 1723 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 AK9Q5TCS8 1911 aa11.22□□□□□ -0.61
CPNE4-210ENST00000512332 GLRX3O76003 335 aaKnown RBP11.21□□□□□ -0.61
CPNE4-210ENST00000512332 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
CPNE4-210ENST00000512332 BRD1O95696 1058 aa11.21□□□□□ -0.61
CPNE4-210ENST00000512332 KRT28Q7Z3Y7 464 aa11.21□□□□□ -0.61
CPNE4-210ENST00000512332 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
CPNE4-210ENST00000512332 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.62
CPNE4-210ENST00000512332 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.62
CPNE4-210ENST00000512332 AXIN2Q9Y2T1 843 aa11.21□□□□□ -0.62
CPNE4-210ENST00000512332 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.62
CPNE4-210ENST00000512332 ERBB3P21860 1342 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 C1orf167Q5SNV9 1468 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
CPNE4-210ENST00000512332 CLASRPQ8N2M8 674 aaKnown RBP11.2□□□□□ -0.62
CPNE4-210ENST00000512332 ARXQ96QS3 562 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-210ENST00000512332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPNE4-210ENST00000512332 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-210ENST00000512332 ABCC6O95255 1503 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 IL25Q9H293 177 aa11.2□□□□□ -0.62
CPNE4-210ENST00000512332 ANXA1P04083 346 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 CLCN1P35523 988 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 LSG1Q9H089 658 aaKnown RBP11.19□□□□□ -0.62
CPNE4-210ENST00000512332 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-210ENST00000512332 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
CPNE4-210ENST00000512332 GRM8O00222 908 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
CPNE4-210ENST00000512332 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-210ENST00000512332 CCDC173Q0VFZ6 552 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 PDIA6Q15084 440 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 ALS2Q96Q42 1657 aa11.18□□□□□ -0.62
CPNE4-210ENST00000512332 MBD3O95983 291 aa11.17□□□□□ -0.62
CPNE4-210ENST00000512332 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-210ENST00000512332 KCNB2Q92953 911 aa11.17□□□□□ -0.62
CPNE4-210ENST00000512332 TTC14Q96N46 770 aa11.17□□□□□ -0.62
CPNE4-210ENST00000512332 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms