RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TATP17735 454 aaPredicted RBP10.38□□□□□ -0.75
HTT-209ENST00000512068 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
HTT-209ENST00000512068 CHRNA2Q15822 529 aa10.38□□□□□ -0.75
HTT-209ENST00000512068 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
HTT-209ENST00000512068 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
HTT-209ENST00000512068 COL18A1P39060 1754 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 FAM83GA6ND36 823 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 MS4A1P11836 297 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 EVA1CP58658 441 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 ZNF530Q6P9A1 599 aaPredicted RBP10.37□□□□□ -0.75
HTT-209ENST00000512068 MCM10Q7L590 875 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
HTT-209ENST00000512068 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 PLIN1O60240 522 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 OSBPP22059 807 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 ARSIQ5FYB1 569 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 RBM26Q5T8P6 1007 aaKnown RBP10.36□□□□□ -0.75
HTT-209ENST00000512068 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 DDX12PQ92771 950 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
HTT-209ENST00000512068 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 LMO7Q8WWI1 1683 aa10.36□□□□□ -0.75
HTT-209ENST00000512068 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
HTT-209ENST00000512068 AKAP4Q5JQC9 854 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 CCDC136Q96JN2 1154 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
HTT-209ENST00000512068 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
HTT-209ENST00000512068 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
HTT-209ENST00000512068 NCAPD2Q15021 1401 aa10.34□□□□□ -0.75
HTT-209ENST00000512068 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
HTT-209ENST00000512068 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
HTT-209ENST00000512068 BCAR3O75815 825 aa10.34□□□□□ -0.75
HTT-209ENST00000512068 FTSJ3Q8IY81 847 aaKnown RBP10.34□□□□□ -0.75
HTT-209ENST00000512068 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
HTT-209ENST00000512068 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
HTT-209ENST00000512068 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
HTT-209ENST00000512068 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 LRRC37A3O60309 1634 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 ZNF853P0CG23 659 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 TEFQ10587 303 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
HTT-209ENST00000512068 ALDH1L2Q3SY69 923 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
HTT-209ENST00000512068 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
HTT-209ENST00000512068 BCL2L13Q9BXK5 485 aa10.33□□□□□ -0.76
HTT-209ENST00000512068 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
HTT-209ENST00000512068 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
HTT-209ENST00000512068 PHF14O94880 888 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 NUDT7P0C024 238 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 CRBNQ96SW2 442 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 CHMP4AQ9BY43 222 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 CRB1P82279 1406 aa10.32□□□□□ -0.76
HTT-209ENST00000512068 CHL1O00533 1208 aa10.31□□□□□ -0.76
HTT-209ENST00000512068 HSP90AB1P08238 724 aaKnown RBP10.31□□□□□ -0.76
HTT-209ENST00000512068 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
HTT-209ENST00000512068 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
HTT-209ENST00000512068 EPAS1Q99814 870 aa10.31□□□□□ -0.76
HTT-209ENST00000512068 OVOS2A0A0G2JMS6 1433 aa10.31□□□□□ -0.76
HTT-209ENST00000512068 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
HTT-209ENST00000512068 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
HTT-209ENST00000512068 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
HTT-209ENST00000512068 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
HTT-209ENST00000512068 PKD1L3Q7Z443 1732 aa10.3□□□□□ -0.76
HTT-209ENST00000512068 RNMTO43148 476 aaKnown RBP10.29□□□□□ -0.76
HTT-209ENST00000512068 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
HTT-209ENST00000512068 IL2RBP14784 551 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 GPIHBP1Q8IV16 184 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
HTT-209ENST00000512068 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 CHMP4BQ9H444 224 aaKnown RBP10.29□□□□□ -0.76
HTT-209ENST00000512068 BTG4Q9NY30 223 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
HTT-209ENST00000512068 PCDH11XQ9BZA7 1347 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 PCDH11YQ9BZA8 1340 aa10.29□□□□□ -0.76
HTT-209ENST00000512068 MEGF6O75095 1541 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 NUTM2BA6NNL0 878 aaPredicted RBP10.28□□□□□ -0.76
HTT-209ENST00000512068 BTBD11A6QL63 1104 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 NUTM2EB1AL46 878 aaPredicted RBP10.28□□□□□ -0.76
HTT-209ENST00000512068 VAMP4O75379 141 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 PRIM1P49642 420 aaKnown RBP10.28□□□□□ -0.76
HTT-209ENST00000512068 FOSBP53539 338 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 AAMPQ13685 434 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
HTT-209ENST00000512068 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
HTT-209ENST00000512068 STK31Q9BXU1 1019 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms