RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 HOXB7P09629 217 aa13.12□□□□□ -0.31
SUB1-210ENST00000511988 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
SUB1-210ENST00000511988 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
SUB1-210ENST00000511988 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
SUB1-210ENST00000511988 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
SUB1-210ENST00000511988 CACNA1FO60840 1977 aa13.12□□□□□ -0.31
SUB1-210ENST00000511988 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
SUB1-210ENST00000511988 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
SUB1-210ENST00000511988 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
SUB1-210ENST00000511988 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
SUB1-210ENST00000511988 APLP1P51693 650 aa13.1□□□□□ -0.31
SUB1-210ENST00000511988 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
SUB1-210ENST00000511988 PIGBQ92521 554 aa13.1□□□□□ -0.31
SUB1-210ENST00000511988 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
SUB1-210ENST00000511988 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
SUB1-210ENST00000511988 PLSCR1O15162 318 aa13.09□□□□□ -0.31
SUB1-210ENST00000511988 TJP1Q07157 1748 aa13.09□□□□□ -0.31
SUB1-210ENST00000511988 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
SUB1-210ENST00000511988 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
SUB1-210ENST00000511988 LY75O60449 1722 aa13.08□□□□□ -0.32
SUB1-210ENST00000511988 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.32
SUB1-210ENST00000511988 RGPD4Q7Z3J3 1758 aa13.08□□□□□ -0.32
SUB1-210ENST00000511988 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
SUB1-210ENST00000511988 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
SUB1-210ENST00000511988 ACSBG1Q96GR2 724 aa13.08□□□□□ -0.32
SUB1-210ENST00000511988 KCNQ3O43525 872 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 VAMP4O75379 141 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
SUB1-210ENST00000511988 SLC15A2Q16348 729 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 PROM2Q8N271 834 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
SUB1-210ENST00000511988 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
SUB1-210ENST00000511988 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
SUB1-210ENST00000511988 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
SUB1-210ENST00000511988 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
SUB1-210ENST00000511988 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
SUB1-210ENST00000511988 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
SUB1-210ENST00000511988 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
SUB1-210ENST00000511988 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
SUB1-210ENST00000511988 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
SUB1-210ENST00000511988 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
SUB1-210ENST00000511988 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
SUB1-210ENST00000511988 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
SUB1-210ENST00000511988 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
SUB1-210ENST00000511988 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
SUB1-210ENST00000511988 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
SUB1-210ENST00000511988 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
SUB1-210ENST00000511988 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
SUB1-210ENST00000511988 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
SUB1-210ENST00000511988 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
SUB1-210ENST00000511988 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
SUB1-210ENST00000511988 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
SUB1-210ENST00000511988 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
SUB1-210ENST00000511988 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
SUB1-210ENST00000511988 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
SUB1-210ENST00000511988 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
SUB1-210ENST00000511988 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
SUB1-210ENST00000511988 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
SUB1-210ENST00000511988 BCAR3O75815 825 aa13.01□□□□□ -0.33
SUB1-210ENST00000511988 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
SUB1-210ENST00000511988 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
SUB1-210ENST00000511988 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
SUB1-210ENST00000511988 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
SUB1-210ENST00000511988 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
SUB1-210ENST00000511988 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
SUB1-210ENST00000511988 ADCY9O60503 1353 aa13□□□□□ -0.33
SUB1-210ENST00000511988 PTPRCP08575 1304 aa13□□□□□ -0.33
SUB1-210ENST00000511988 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
SUB1-210ENST00000511988 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
SUB1-210ENST00000511988 STARD3NLO95772 234 aa13□□□□□ -0.33
SUB1-210ENST00000511988 SIK1P57059 783 aa13□□□□□ -0.33
SUB1-210ENST00000511988 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 PCNTO95613 3336 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 KIF3CO14782 793 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 NEFLP07196 543 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
SUB1-210ENST00000511988 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
SUB1-210ENST00000511988 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
SUB1-210ENST00000511988 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 MS4A1P11836 297 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
SUB1-210ENST00000511988 HTRA3P83110 453 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 HYPKQ9NX55 129 aa12.98□□□□□ -0.33
SUB1-210ENST00000511988 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 JMYQ8N9B5 988 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 FRAT1Q92837 279 aaPredicted RBP12.97□□□□□ -0.33
SUB1-210ENST00000511988 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
SUB1-210ENST00000511988 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
SUB1-210ENST00000511988 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms