RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 MARSP56192 900 aaKnown RBP11.59□□□□□ -0.55
PDGFC-207ENST00000511985 NDFIP2Q9NV92 336 aa11.59□□□□□ -0.55
PDGFC-207ENST00000511985 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
PDGFC-207ENST00000511985 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
PDGFC-207ENST00000511985 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
PDGFC-207ENST00000511985 BCRP11274 1271 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 CCDC102BQ68D86 513 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 C1orf216Q8TAB5 229 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 ZDHHC1Q8WTX9 485 aa11.58□□□□□ -0.56
PDGFC-207ENST00000511985 ZCCHC2Q9C0B9 1178 aaKnown RBP11.58□□□□□ -0.56
PDGFC-207ENST00000511985 A0A1W2PNR3 127 aa11.57□□□□□ -0.56
PDGFC-207ENST00000511985 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
PDGFC-207ENST00000511985 FOXK2Q01167 660 aa11.57□□□□□ -0.56
PDGFC-207ENST00000511985 ARSJQ5FYB0 599 aaPredicted RBP11.57□□□□□ -0.56
PDGFC-207ENST00000511985 KLRG1Q96E93 195 aa11.57□□□□□ -0.56
PDGFC-207ENST00000511985 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
PDGFC-207ENST00000511985 C2CD2LO14523 706 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 TXLNAP40222 546 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 MAP2K3P46734 347 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 CTBSQ01459 385 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 OXCT2Q9BYC2 517 aaPredicted RBP11.56□□□□□ -0.56
PDGFC-207ENST00000511985 ENAMQ9NRM1 1142 aa11.56□□□□□ -0.56
PDGFC-207ENST00000511985 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
PDGFC-207ENST00000511985 FGFR3P22607 806 aa11.55□□□□□ -0.56
PDGFC-207ENST00000511985 RASSF7Q02833 373 aa11.55□□□□□ -0.56
PDGFC-207ENST00000511985 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
PDGFC-207ENST00000511985 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
PDGFC-207ENST00000511985 ZDHHC3Q9NYG2 299 aa11.55□□□□□ -0.56
PDGFC-207ENST00000511985 RNF225M0QZC1 329 aaPredicted RBP11.54□□□□□ -0.56
PDGFC-207ENST00000511985 NOS2P35228 1153 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 IRS1P35568 1242 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 FIGNL1Q6PIW4 674 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 NLRP8Q86W28 1048 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 L3MBTL2Q969R5 705 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 CALR3Q96L12 384 aaKnown RBP11.54□□□□□ -0.56
PDGFC-207ENST00000511985 HCN2Q9UL51 889 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 PCDHGC4Q9Y5F7 938 aa11.54□□□□□ -0.56
PDGFC-207ENST00000511985 MAFBQ9Y5Q3 323 aaPredicted RBP11.54□□□□□ -0.56
PDGFC-207ENST00000511985 DCDC2BA2VCK2 349 aa11.53□□□□□ -0.56
PDGFC-207ENST00000511985 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
PDGFC-207ENST00000511985 BMP4P12644 408 aa11.53□□□□□ -0.56
PDGFC-207ENST00000511985 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
PDGFC-207ENST00000511985 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
PDGFC-207ENST00000511985 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
PDGFC-207ENST00000511985 SFI1A8K8P3 1242 aa11.52□□□□□ -0.57
PDGFC-207ENST00000511985 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
PDGFC-207ENST00000511985 OIP5O43482 229 aa11.52□□□□□ -0.57
PDGFC-207ENST00000511985 TEAD4Q15561 434 aa11.52□□□□□ -0.57
PDGFC-207ENST00000511985 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
PDGFC-207ENST00000511985 SCARF2Q96GP6 870 aaPredicted RBP11.52□□□□□ -0.57
PDGFC-207ENST00000511985 TSPAN10Q9H1Z9 355 aaPredicted RBP11.52□□□□□ -0.57
PDGFC-207ENST00000511985 DKK1O94907 266 aa11.51□□□□□ -0.57
PDGFC-207ENST00000511985 GDF11O95390 407 aa11.51□□□□□ -0.57
PDGFC-207ENST00000511985 SIX5Q8N196 739 aa11.51□□□□□ -0.57
PDGFC-207ENST00000511985 TSEN2Q8NCE0 465 aaKnown RBP11.51□□□□□ -0.57
PDGFC-207ENST00000511985 ZNF232Q9UNY5 417 aa11.51□□□□□ -0.57
PDGFC-207ENST00000511985 CNTNAP5Q8WYK1 1306 aa11.51□□□□□ -0.57
PDGFC-207ENST00000511985 TMEM151AQ8N4L1 468 aa11.5□□□□□ -0.57
PDGFC-207ENST00000511985 KCTD17Q8N5Z5 321 aa11.5□□□□□ -0.57
PDGFC-207ENST00000511985 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
PDGFC-207ENST00000511985 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
PDGFC-207ENST00000511985 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
PDGFC-207ENST00000511985 KHNYNO15037 678 aaKnown RBP11.49□□□□□ -0.57
PDGFC-207ENST00000511985 MAPTP10636 758 aaKnown RBP11.49□□□□□ -0.57
PDGFC-207ENST00000511985 RASA1P20936 1047 aa11.49□□□□□ -0.57
PDGFC-207ENST00000511985 TNP2Q05952 138 aa11.49□□□□□ -0.57
PDGFC-207ENST00000511985 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
PDGFC-207ENST00000511985 GJA3Q9Y6H8 435 aa11.49□□□□□ -0.57
PDGFC-207ENST00000511985 SERTM1A2A2V5 107 aa11.48□□□□□ -0.57
PDGFC-207ENST00000511985 CD33P20138 364 aa11.48□□□□□ -0.57
PDGFC-207ENST00000511985 LRRC4BQ9NT99 713 aa11.48□□□□□ -0.57
PDGFC-207ENST00000511985 ZNF777Q9ULD5 760 aaPredicted RBP11.48□□□□□ -0.57
PDGFC-207ENST00000511985 EML1O00423 815 aa11.47□□□□□ -0.57
PDGFC-207ENST00000511985 GGA1Q9UJY5 639 aa11.47□□□□□ -0.57
PDGFC-207ENST00000511985 GDF2Q9UK05 429 aaPredicted RBP11.47□□□□□ -0.57
PDGFC-207ENST00000511985 M0R2N6 131 aa11.46□□□□□ -0.57
PDGFC-207ENST00000511985 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
PDGFC-207ENST00000511985 LRRC69Q6ZNQ3 347 aa11.46□□□□□ -0.57
PDGFC-207ENST00000511985 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.57
PDGFC-207ENST00000511985 RBM19Q9Y4C8 960 aaKnown RBP11.46□□□□□ -0.57
PDGFC-207ENST00000511985 DNMT3AQ9Y6K1 912 aaPredicted RBP11.46□□□□□ -0.57
PDGFC-207ENST00000511985 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
PDGFC-207ENST00000511985 PSMA6P60900 246 aaKnown RBP11.45□□□□□ -0.58
PDGFC-207ENST00000511985 CRTC2Q53ET0 693 aaPredicted RBP11.45□□□□□ -0.58
PDGFC-207ENST00000511985 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
PDGFC-207ENST00000511985 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
PDGFC-207ENST00000511985 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
PDGFC-207ENST00000511985 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
PDGFC-207ENST00000511985 SNRPNP63162 240 aaKnown RBP11.44□□□□□ -0.58
PDGFC-207ENST00000511985 STRN4Q9NRL3 753 aa11.44□□□□□ -0.58
PDGFC-207ENST00000511985 C21orf2O43822 256 aa11.43□□□□□ -0.58
PDGFC-207ENST00000511985 LGR5O75473 907 aa11.43□□□□□ -0.58
PDGFC-207ENST00000511985 KANK3Q6NY19 840 aa11.43□□□□□ -0.58
PDGFC-207ENST00000511985 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
PDGFC-207ENST00000511985 BEND7Q8N7W2 519 aaPredicted RBP11.43□□□□□ -0.58
PDGFC-207ENST00000511985 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms