RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 GPR162Q16538 588 aa22.23■■□□□ 1.15
SMN2-210ENST00000511812 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
SMN2-210ENST00000511812 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
SMN2-210ENST00000511812 NLGN2Q8NFZ4 835 aa22.23■■□□□ 1.15
SMN2-210ENST00000511812 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
SMN2-210ENST00000511812 USP42Q9H9J4 1324 aaKnown RBP22.23■■□□□ 1.15
SMN2-210ENST00000511812 RIPK4P57078 832 aa22.22■■□□□ 1.15
SMN2-210ENST00000511812 SRP68Q9UHB9 627 aaKnown RBP22.22■■□□□ 1.15
SMN2-210ENST00000511812 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
SMN2-210ENST00000511812 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
SMN2-210ENST00000511812 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
SMN2-210ENST00000511812 COL15A1P39059 1388 aa22.21■■□□□ 1.15
SMN2-210ENST00000511812 A0A087WZG4 1122 aa22.2■■□□□ 1.14
SMN2-210ENST00000511812 SNRPA1P09661 255 aaKnown RBP22.2■■□□□ 1.14
SMN2-210ENST00000511812 RUNDC1Q96C34 613 aa22.2■■□□□ 1.14
SMN2-210ENST00000511812 ZNF330Q9Y3S2 320 aaPredicted RBP22.2■■□□□ 1.14
SMN2-210ENST00000511812 TMPOP42166 694 aaKnown RBP22.19■■□□□ 1.14
SMN2-210ENST00000511812 USPL1Q5W0Q7 1092 aa22.19■■□□□ 1.14
SMN2-210ENST00000511812 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
SMN2-210ENST00000511812 MIS18AQ9NYP9 233 aa22.19■■□□□ 1.14
SMN2-210ENST00000511812 NARFQ9UHQ1 456 aa22.19■■□□□ 1.14
SMN2-210ENST00000511812 ADAMTS8Q9UP79 889 aa22.19■■□□□ 1.14
SMN2-210ENST00000511812 DLG5Q8TDM6 1919 aa22.19■■□□□ 1.14
SMN2-210ENST00000511812 C4AP0C0L4 1744 aa22.18■■□□□ 1.14
SMN2-210ENST00000511812 FKBP8Q14318 412 aa22.18■■□□□ 1.14
SMN2-210ENST00000511812 ANP32CO43423 234 aa22.17■■□□□ 1.14
SMN2-210ENST00000511812 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
SMN2-210ENST00000511812 IL6STP40189 918 aaPredicted RBP22.16■■□□□ 1.14
SMN2-210ENST00000511812 EIF5P55010 431 aaKnown RBP22.16■■□□□ 1.14
SMN2-210ENST00000511812 RRP7AQ9Y3A4 280 aaKnown RBP22.16■■□□□ 1.14
SMN2-210ENST00000511812 A1BGP04217 495 aa22.15■■□□□ 1.14
SMN2-210ENST00000511812 YY1P25490 414 aa22.15■■□□□ 1.14
SMN2-210ENST00000511812 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
SMN2-210ENST00000511812 PRAMEF22A3QJZ6 481 aa22.13■■□□□ 1.13
SMN2-210ENST00000511812 TSPYL4Q9UJ04 414 aa22.13■■□□□ 1.13
SMN2-210ENST00000511812 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
SMN2-210ENST00000511812 TBC1D2BQ9UPU7 963 aa22.11■■□□□ 1.13
SMN2-210ENST00000511812 TM4SF1P30408 202 aa22.1■■□□□ 1.13
SMN2-210ENST00000511812 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
SMN2-210ENST00000511812 TGFB2P61812 414 aa22.1■■□□□ 1.13
SMN2-210ENST00000511812 DDR1Q08345 913 aa22.1■■□□□ 1.13
SMN2-210ENST00000511812 C10orf71Q711Q0 1435 aa22.09■■□□□ 1.13
SMN2-210ENST00000511812 POLRMTO00411 1230 aaKnown RBP22.09■■□□□ 1.13
SMN2-210ENST00000511812 PIP4K2AP48426 406 aaPredicted RBP22.09■■□□□ 1.13
SMN2-210ENST00000511812 NFIXQ14938 502 aa22.09■■□□□ 1.13
SMN2-210ENST00000511812 BABAM1Q9NWV8 329 aa22.09■■□□□ 1.13
SMN2-210ENST00000511812 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
SMN2-210ENST00000511812 YBX3P16989 372 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMN2-210ENST00000511812 BICDL1Q6ZP65 573 aa22.08■■□□□ 1.13
SMN2-210ENST00000511812 DZIP3Q86Y13 1208 aaKnown RBP22.08■■□□□ 1.13
SMN2-210ENST00000511812 BCL2L12Q9HB09 334 aa22.08■■□□□ 1.13
SMN2-210ENST00000511812 WWC3Q9ULE0 1092 aa22.07■■□□□ 1.12
SMN2-210ENST00000511812 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
SMN2-210ENST00000511812 MRS2Q9HD23 443 aa22.06■■□□□ 1.12
SMN2-210ENST00000511812 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
SMN2-210ENST00000511812 A0A0G2JLW4 131 aa22.05■■□□□ 1.12
SMN2-210ENST00000511812 APAF1O14727 1248 aa22.05■■□□□ 1.12
SMN2-210ENST00000511812 SERPINB2P05120 415 aa22.05■■□□□ 1.12
SMN2-210ENST00000511812 TRIM35Q9UPQ4 493 aa22.05■■□□□ 1.12
SMN2-210ENST00000511812 PXDNLA1KZ92 1463 aa22.04■■□□□ 1.12
SMN2-210ENST00000511812 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
SMN2-210ENST00000511812 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
SMN2-210ENST00000511812 NBPF26B4DH59 902 aa22.03■■□□□ 1.12
SMN2-210ENST00000511812 CAMTA2O94983 1202 aa22.03■■□□□ 1.12
SMN2-210ENST00000511812 DPEP1P16444 411 aa22.03■■□□□ 1.12
SMN2-210ENST00000511812 TBC1D9BQ66K14 1250 aa22.03■■□□□ 1.12
SMN2-210ENST00000511812 NBPF10Q6P3W6 841 aaKnown RBP22.03■■□□□ 1.12
SMN2-210ENST00000511812 NBPF15Q8N660 670 aa22.03■■□□□ 1.12
SMN2-210ENST00000511812 KIF13BQ9NQT8 1826 aa22.02■■□□□ 1.12
SMN2-210ENST00000511812 NPHP1O15259 732 aa22.02■■□□□ 1.12
SMN2-210ENST00000511812 SETDB2Q96T68 719 aa22.02■■□□□ 1.12
SMN2-210ENST00000511812 CALD1Q05682 793 aaKnown RBP22.01■■□□□ 1.11
SMN2-210ENST00000511812 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
SMN2-210ENST00000511812 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
SMN2-210ENST00000511812 LAMB4A4D0S4 1761 aa22■■□□□ 1.11
SMN2-210ENST00000511812 CHL1O00533 1208 aa22■■□□□ 1.11
SMN2-210ENST00000511812 EIF2S2P20042 333 aaKnown RBP22■■□□□ 1.11
SMN2-210ENST00000511812 CLEC4GQ6UXB4 293 aa22■■□□□ 1.11
SMN2-210ENST00000511812 SCN7AQ01118 1682 aa22■■□□□ 1.11
SMN2-210ENST00000511812 CHD4Q14839 1912 aa22■■□□□ 1.11
SMN2-210ENST00000511812 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
SMN2-210ENST00000511812 MYL6BP14649 208 aa21.99■■□□□ 1.11
SMN2-210ENST00000511812 PIM2Q9P1W9 311 aa21.99■■□□□ 1.11
SMN2-210ENST00000511812 ERBB4Q15303 1308 aa21.99■■□□□ 1.11
SMN2-210ENST00000511812 KIF6Q6ZMV9 814 aa21.98■■□□□ 1.11
SMN2-210ENST00000511812 CFAP44Q96MT7 982 aa21.98■■□□□ 1.11
SMN2-210ENST00000511812 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
SMN2-210ENST00000511812 RGL2O15211 777 aa21.97■■□□□ 1.11
SMN2-210ENST00000511812 CHRNA5P30532 468 aa21.96■■□□□ 1.11
SMN2-210ENST00000511812 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
SMN2-210ENST00000511812 CNBD1Q8NA66 436 aa21.96■■□□□ 1.11
SMN2-210ENST00000511812 ST5P78524 1137 aa21.95■■□□□ 1.1
SMN2-210ENST00000511812 AFDNP55196 1824 aaKnown RBP21.94■■□□□ 1.1
SMN2-210ENST00000511812 H0YIN7 160 aa21.94■■□□□ 1.1
SMN2-210ENST00000511812 KCNA3P22001 575 aa21.94■■□□□ 1.1
SMN2-210ENST00000511812 GNAI1P63096 354 aa21.94■■□□□ 1.1
SMN2-210ENST00000511812 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
SMN2-210ENST00000511812 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMN2-210ENST00000511812 KIAA1551Q9HCM1 1747 aa21.94■■□□□ 1.1
SMN2-210ENST00000511812 BCORQ6W2J9 1755 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms