RNA–Protein interactions for RNA: ENST00000511657.1

SLC35B1-215, Transcript of solute carrier family 35 member B1, human

TSL 3

Gene SLC35B1, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC35B1-215	ENST00000511657	SMC4	Q9NTJ3	1288 aa		10.9	□□□□□ -0.66
SLC35B1-215	ENST00000511657	NUP98	P52948	1817 aa		10.9	□□□□□ -0.66
SLC35B1-215	ENST00000511657	EP400	Q96L91	3159 aa		10.89	□□□□□ -0.67
SLC35B1-215	ENST00000511657	TRIM37	O94972	964 aa		10.89	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SSH1	Q8WYL5	1049 aa		10.89	□□□□□ -0.67
SLC35B1-215	ENST00000511657	DBF4	Q9UBU7	674 aa	Predicted RBP	10.89	□□□□□ -0.67
SLC35B1-215	ENST00000511657	BCOR	Q6W2J9	1755 aa		10.89	□□□□□ -0.67
SLC35B1-215	ENST00000511657	TUBGCP6	Q96RT7	1819 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	RNF123	Q5XPI4	1314 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PLSCR1	O15162	318 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	IPO8	O15397	1037 aa	Known RBP	10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	EIF2S2	P20042	333 aa	Known RBP	10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	ATP6V1A	P38606	617 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SLC27A3	Q5K4L6	730 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	HYPK	Q9NX55	129 aa		10.88	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PTPRC	P08575	1304 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	C4A	P0C0L4	1744 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	MS4A1	P11836	297 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	RRP1	P56182	461 aa	Known RBP	10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	MRPL50	Q8N5N7	158 aa	Known RBP	10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	ARHGAP45	Q92619	1136 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	USP16	Q9Y5T5	823 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PXDNL	A1KZ92	1463 aa		10.87	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CNTNAP4	Q9C0A0	1308 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SCN7A	Q01118	1682 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PRAMEF22	A3QJZ6	481 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	BCAR3	O75815	825 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SLC4A2	P04920	1241 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CANX	P27824	592 aa	Known RBP	10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SF3B2	Q13435	895 aa	Known RBP	10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	ZKSCAN2	Q63HK3	967 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PTF1A	Q7RTS3	328 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CCDC125	Q86Z20	511 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	DNAJC10	Q8IXB1	793 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SLC4A9	Q96Q91	983 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	BCL2L13	Q9BXK5	485 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CHPF2	Q9P2E5	772 aa		10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CCNL1	Q9UK58	526 aa	Predicted RBP	10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.86	□□□□□ -0.67
SLC35B1-215	ENST00000511657	APBA3	O96018	575 aa		10.85	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CYP19A1	P11511	503 aa	Predicted RBP	10.85	□□□□□ -0.67
SLC35B1-215	ENST00000511657	API5	Q9BZZ5	524 aa	Known RBP	10.85	□□□□□ -0.67
SLC35B1-215	ENST00000511657	DDX58	O95786	925 aa	Known RBP	10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	IL6ST	P40189	918 aa	Predicted RBP	10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	FLII	Q13045	1269 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	PDE3A	Q14432	1141 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	RC3H1	Q5TC82	1133 aa	Known RBP	10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	ATF7IP	Q6VMQ6	1270 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	NPM2	Q86SE8	214 aa	Known RBP	10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	NECTIN2	Q92692	538 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	CCDC87	Q9NVE4	849 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	MYH3	P11055	1940 aa		10.84	□□□□□ -0.67
SLC35B1-215	ENST00000511657	NEFL	P07196	543 aa		10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	CRKL	P46109	303 aa	Known RBP	10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	BAG6	P46379	1132 aa		10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ITPK1	Q13572	414 aa		10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	PDIA6	Q15084	440 aa		10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	FRAT1	Q92837	279 aa	Predicted RBP	10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	NOB1	Q9ULX3	412 aa	Known RBP	10.83	□□□□□ -0.68
SLC35B1-215	ENST00000511657	SOCS7	O14512	581 aa		10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	TCERG1	O14776	1098 aa	Known RBP	10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	FKBP5	Q13451	457 aa	Predicted RBP	10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	TXNRD1	Q16881	649 aa		10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	LRP10	Q7Z4F1	713 aa		10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	FTSJ3	Q8IY81	847 aa	Known RBP	10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ZBTB1	Q9Y2K1	713 aa		10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ABCC4	O15439	1325 aa		10.82	□□□□□ -0.68
SLC35B1-215	ENST00000511657		A0A087WZG4	1122 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	NBPF26	B4DH59	902 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	A1BG	P04217	495 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	TRIM27	P14373	513 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	MYL6B	P14649	208 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	NBPF14	Q5TI25	921 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	NBPF10	Q6P3W6	841 aa	Known RBP	10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	DZIP1L	Q8IYY4	767 aa	Known RBP	10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	NBPF15	Q8N660	670 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	LINC00116	Q8NCU8	138 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ATP10D	Q9P241	1426 aa		10.81	□□□□□ -0.68
SLC35B1-215	ENST00000511657	COL15A1	P39059	1388 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	RGL2	O15211	777 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ADRA2B	P18089	450 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	PROSER3	Q2NL68	480 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	INTS5	Q6P9B9	1019 aa	Known RBP	10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	KIF6	Q6ZMV9	814 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	G2E3	Q7L622	706 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	AK7	Q96M32	723 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	CHMP4B	Q9H444	224 aa	Known RBP	10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	PHAX	Q9H814	394 aa	Known RBP	10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	CASZ1	Q86V15	1759 aa		10.8	□□□□□ -0.68
SLC35B1-215	ENST00000511657	COL24A1	Q17RW2	1714 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	PLIN1	O60240	522 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	RPS6KA4	O75676	772 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	ANXA1	P04083	346 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	EIF5	P55010	431 aa	Known RBP	10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	KSR2	Q6VAB6	950 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	COPS6	Q7L5N1	327 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	PLBD2	Q8NHP8	589 aa		10.79	□□□□□ -0.68
SLC35B1-215	ENST00000511657	XAGE3	Q8WTP9	111 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms