RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 NUDT16Q96DE0 195 aaKnown RBP9.71□□□□□ -0.86
COPS4-209ENST00000511653 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
COPS4-209ENST00000511653 CAMTA1Q9Y6Y1 1673 aa9.7□□□□□ -0.86
COPS4-209ENST00000511653 POLR3AO14802 1390 aaPredicted RBP9.7□□□□□ -0.86
COPS4-209ENST00000511653 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
COPS4-209ENST00000511653 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
COPS4-209ENST00000511653 ZC3H6P61129 1189 aaKnown RBP9.69□□□□□ -0.86
COPS4-209ENST00000511653 QPCTQ16769 361 aa9.69□□□□□ -0.86
COPS4-209ENST00000511653 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
COPS4-209ENST00000511653 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
COPS4-209ENST00000511653 SULF1Q8IWU6 871 aa9.69□□□□□ -0.86
COPS4-209ENST00000511653 STRN4Q9NRL3 753 aa9.69□□□□□ -0.86
COPS4-209ENST00000511653 PARP4Q9UKK3 1724 aaKnown RBP9.69□□□□□ -0.86
COPS4-209ENST00000511653 SSH2Q76I76 1423 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 MCM6Q14566 821 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 R3HDM1Q15032 1099 aaKnown RBP9.68□□□□□ -0.86
COPS4-209ENST00000511653 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 CDK19Q9BWU1 502 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 ACEP12821 1306 aa9.68□□□□□ -0.86
COPS4-209ENST00000511653 GUCA2AQ02747 115 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 EZH2Q15910 746 aaKnown RBP9.67□□□□□ -0.86
COPS4-209ENST00000511653 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 SPTLC1O15269 473 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 TRIM37O94972 964 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 PBX2P40425 430 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 RFC5P40937 340 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
COPS4-209ENST00000511653 LRRC37A3O60309 1634 aa9.66□□□□□ -0.86
COPS4-209ENST00000511653 GCGRP47871 477 aa9.66□□□□□ -0.86
COPS4-209ENST00000511653 NBPF8Q3BBV2 869 aa9.66□□□□□ -0.86
COPS4-209ENST00000511653 PIK3C2AO00443 1686 aa9.66□□□□□ -0.86
COPS4-209ENST00000511653 RGPD5Q99666 1765 aa9.66□□□□□ -0.86
COPS4-209ENST00000511653 USP19O94966 1318 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
COPS4-209ENST00000511653 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 PPIP5K1Q6PFW1 1433 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 COL18A1P39060 1754 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 CPDO75976 1380 aa9.65□□□□□ -0.86
COPS4-209ENST00000511653 COL5A2P05997 1499 aaPredicted RBP9.65□□□□□ -0.87
COPS4-209ENST00000511653 KDM4AO75164 1064 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 FLIIQ13045 1269 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 C1orf115Q9H7X2 142 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 SNRKQ9NRH2 765 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
COPS4-209ENST00000511653 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
COPS4-209ENST00000511653 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 PCDHGC3Q9UN70 934 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 SLIT3O75094 1523 aa9.64□□□□□ -0.87
COPS4-209ENST00000511653 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
COPS4-209ENST00000511653 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 HOXA2O43364 376 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 APBA3O96018 575 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 PPP2R2DQ66LE6 453 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 TRPM1Q7Z4N2 1603 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
COPS4-209ENST00000511653 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
COPS4-209ENST00000511653 USP6P35125 1406 aa9.62□□□□□ -0.87
COPS4-209ENST00000511653 LILRB3O75022 631 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 EVA1CP58658 441 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPS4-209ENST00000511653 ADGRD1Q6QNK2 874 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 TCP11L2Q8N4U5 519 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
COPS4-209ENST00000511653 CASZ1Q86V15 1759 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 HRO43593 1189 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 GCP02774 474 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
COPS4-209ENST00000511653 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
COPS4-209ENST00000511653 CRB1P82279 1406 aa9.6□□□□□ -0.87
COPS4-209ENST00000511653 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
COPS4-209ENST00000511653 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 RNF40O75150 1001 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 FUT2Q10981 343 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 NLRP13Q86W25 1043 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 OVOS2A0A0J9YW53 1432 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 OVOS2Q6IE36 1432 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 MON2Q7Z3U7 1717 aa9.59□□□□□ -0.87
COPS4-209ENST00000511653 TK2O00142 265 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 CFHP08603 1231 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 FDX1P10109 184 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 CPSF1Q10570 1443 aaKnown RBP9.58□□□□□ -0.88
COPS4-209ENST00000511653 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
COPS4-209ENST00000511653 THRAP3Q9Y2W1 955 aaKnown RBP9.58□□□□□ -0.88
COPS4-209ENST00000511653 NFAT5O94916 1531 aa9.57□□□□□ -0.88
COPS4-209ENST00000511653 BRD4O60885 1362 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms