RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
COL12A1-210ENST00000511023 PNNQ9H307 717 aaKnown RBP19.26■□□□□ 0.67
COL12A1-210ENST00000511023 COL15A1P39059 1388 aa19.25■□□□□ 0.67
COL12A1-210ENST00000511023 STARD3NLO95772 234 aa19.25■□□□□ 0.67
COL12A1-210ENST00000511023 FKBP8Q14318 412 aa19.25■□□□□ 0.67
COL12A1-210ENST00000511023 TAF7Q15545 349 aaPredicted RBP19.25■□□□□ 0.67
COL12A1-210ENST00000511023 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
COL12A1-210ENST00000511023 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
COL12A1-210ENST00000511023 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
COL12A1-210ENST00000511023 TEX13AQ9BXU3 409 aaPredicted RBP19.24■□□□□ 0.67
COL12A1-210ENST00000511023 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
COL12A1-210ENST00000511023 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
COL12A1-210ENST00000511023 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
COL12A1-210ENST00000511023 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
COL12A1-210ENST00000511023 A1BGP04217 495 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 DDR1Q08345 913 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 GPR162Q16538 588 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 BCL2L12Q9HB09 334 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 NARFQ9UHQ1 456 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
COL12A1-210ENST00000511023 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL12A1-210ENST00000511023 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
COL12A1-210ENST00000511023 RIPK4P57078 832 aa19.21■□□□□ 0.67
COL12A1-210ENST00000511023 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL12A1-210ENST00000511023 KDM3BQ7LBC6 1761 aa19.21■□□□□ 0.67
COL12A1-210ENST00000511023 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
COL12A1-210ENST00000511023 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
COL12A1-210ENST00000511023 ZPR1O75312 459 aa19.2■□□□□ 0.66
COL12A1-210ENST00000511023 TM4SF1P30408 202 aa19.2■□□□□ 0.66
COL12A1-210ENST00000511023 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
COL12A1-210ENST00000511023 RRP7AQ9Y3A4 280 aaKnown RBP19.2■□□□□ 0.66
COL12A1-210ENST00000511023 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
COL12A1-210ENST00000511023 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
COL12A1-210ENST00000511023 RUNDC1Q96C34 613 aa19.19■□□□□ 0.66
COL12A1-210ENST00000511023 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
COL12A1-210ENST00000511023 YY1P25490 414 aa19.18■□□□□ 0.66
COL12A1-210ENST00000511023 IL6STP40189 918 aaPredicted RBP19.18■□□□□ 0.66
COL12A1-210ENST00000511023 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
COL12A1-210ENST00000511023 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
COL12A1-210ENST00000511023 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
COL12A1-210ENST00000511023 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
COL12A1-210ENST00000511023 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
COL12A1-210ENST00000511023 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
COL12A1-210ENST00000511023 NFIXQ14938 502 aa19.16■□□□□ 0.66
COL12A1-210ENST00000511023 A0A087WZG4 1122 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
COL12A1-210ENST00000511023 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 TRIM35Q9UPQ4 493 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
COL12A1-210ENST00000511023 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
COL12A1-210ENST00000511023 SCN7AQ01118 1682 aa19.14■□□□□ 0.66
COL12A1-210ENST00000511023 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.66
COL12A1-210ENST00000511023 LAMB4A4D0S4 1761 aa19.14■□□□□ 0.65
COL12A1-210ENST00000511023 A0A0G2JLW4 131 aa19.13■□□□□ 0.65
COL12A1-210ENST00000511023 GIGYF1O75420 1035 aaPredicted RBP19.13■□□□□ 0.65
COL12A1-210ENST00000511023 CAMTA2O94983 1202 aa19.13■□□□□ 0.65
COL12A1-210ENST00000511023 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
COL12A1-210ENST00000511023 CHD4Q14839 1912 aa19.12■□□□□ 0.65
COL12A1-210ENST00000511023 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
COL12A1-210ENST00000511023 NRXN2Q9P2S2 1712 aa19.12■□□□□ 0.65
COL12A1-210ENST00000511023 TGFB2P61812 414 aa19.12■□□□□ 0.65
COL12A1-210ENST00000511023 DPEP1P16444 411 aa19.11■□□□□ 0.65
COL12A1-210ENST00000511023 TBC1D9BQ66K14 1250 aa19.11■□□□□ 0.65
COL12A1-210ENST00000511023 TSPYL4Q9UJ04 414 aa19.11■□□□□ 0.65
COL12A1-210ENST00000511023 GRIN3BO60391 1043 aa19.1■□□□□ 0.65
COL12A1-210ENST00000511023 KCNA3P22001 575 aa19.1■□□□□ 0.65
COL12A1-210ENST00000511023 BICDL1Q6ZP65 573 aa19.1■□□□□ 0.65
COL12A1-210ENST00000511023 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
COL12A1-210ENST00000511023 BCORQ6W2J9 1755 aa19.1■□□□□ 0.65
COL12A1-210ENST00000511023 SERPINB2P05120 415 aa19.09■□□□□ 0.65
COL12A1-210ENST00000511023 BABAM1Q9NWV8 329 aa19.09■□□□□ 0.65
COL12A1-210ENST00000511023 BRCA1P38398 1863 aaKnown RBP19.08■□□□□ 0.65
COL12A1-210ENST00000511023 APAF1O14727 1248 aa19.08■□□□□ 0.64
COL12A1-210ENST00000511023 CHL1O00533 1208 aa19.07■□□□□ 0.64
COL12A1-210ENST00000511023 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
COL12A1-210ENST00000511023 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
COL12A1-210ENST00000511023 ANP32CO43423 234 aa19.06■□□□□ 0.64
COL12A1-210ENST00000511023 CHRNA5P30532 468 aa19.06■□□□□ 0.64
COL12A1-210ENST00000511023 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
COL12A1-210ENST00000511023 BCS1LQ9Y276 419 aa19.04■□□□□ 0.64
COL12A1-210ENST00000511023 HLFQ16534 295 aa19.03■□□□□ 0.64
COL12A1-210ENST00000511023 PRR5LQ6MZQ0 368 aa19.03■□□□□ 0.64
COL12A1-210ENST00000511023 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
COL12A1-210ENST00000511023 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
COL12A1-210ENST00000511023 ZNF784Q8NCA9 323 aaPredicted RBP19.03■□□□□ 0.64
COL12A1-210ENST00000511023 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
COL12A1-210ENST00000511023 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
COL12A1-210ENST00000511023 MYL6BP14649 208 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 PDIA6Q15084 440 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 TTLL7Q6ZT98 887 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 LRP10Q7Z4F1 713 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 CCDC24Q8N4L8 307 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 SETDB2Q96T68 719 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 ANKRD31Q8N7Z5 1873 aa19.02■□□□□ 0.64
COL12A1-210ENST00000511023 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
COL12A1-210ENST00000511023 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
COL12A1-210ENST00000511023 CFAP44Q96MT7 982 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms