RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 CHMP3Q9Y3E7 222 aa6.93□□□□□ -1.3
SMAD1-208ENST00000510948 HRH3Q9Y5N1 445 aa6.93□□□□□ -1.3
SMAD1-208ENST00000510948 FOXC1Q12948 553 aa6.92□□□□□ -1.3
SMAD1-208ENST00000510948 CLN3Q13286 438 aa6.92□□□□□ -1.3
SMAD1-208ENST00000510948 TLR1Q15399 786 aa6.92□□□□□ -1.3
SMAD1-208ENST00000510948 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
SMAD1-208ENST00000510948 Q6ZVU0 165 aa6.92□□□□□ -1.3
SMAD1-208ENST00000510948 SNIP1Q8TAD8 396 aaKnown RBP6.92□□□□□ -1.3
SMAD1-208ENST00000510948 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
SMAD1-208ENST00000510948 MPSTP25325 297 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 PTGIRP43119 386 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 CENPCQ03188 943 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 CBLBQ13191 982 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 TEAD4Q15561 434 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 COX20Q5RI15 118 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 MRRFQ96E11 262 aaKnown RBP6.91□□□□□ -1.3
SMAD1-208ENST00000510948 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
SMAD1-208ENST00000510948 PKD2L1Q9P0L9 805 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 STIM2Q9P246 746 aa6.91□□□□□ -1.3
SMAD1-208ENST00000510948 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 COL19A1Q14993 1142 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 RGL4Q8IZJ4 473 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 NBPF15Q8N660 670 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 ITPKCQ96DU7 683 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 QTRT2Q9H974 415 aaKnown RBP6.9□□□□□ -1.3
SMAD1-208ENST00000510948 USP3Q9Y6I4 520 aa6.9□□□□□ -1.3
SMAD1-208ENST00000510948 NDUFB5O43674 189 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 ZIC2O95409 532 aaPredicted RBP6.89□□□□□ -1.31
SMAD1-208ENST00000510948 NOS2P35228 1153 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 EIF1AXP47813 144 aaKnown RBP6.89□□□□□ -1.31
SMAD1-208ENST00000510948 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 MYO19Q96H55 970 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 NLRP3Q96P20 1036 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 FHDC1Q9C0D6 1143 aaPredicted RBP6.89□□□□□ -1.31
SMAD1-208ENST00000510948 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
SMAD1-208ENST00000510948 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
SMAD1-208ENST00000510948 EML1O00423 815 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 TNFRSF10BO14763 440 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 BRD2P25440 801 aaKnown RBP6.88□□□□□ -1.31
SMAD1-208ENST00000510948 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
SMAD1-208ENST00000510948 WDR4P57081 412 aaKnown RBP6.88□□□□□ -1.31
SMAD1-208ENST00000510948 AAMPQ13685 434 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 TMC7Q7Z402 723 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 AGBL1Q96MI9 1066 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 CABP1Q9NZU7 370 aa6.88□□□□□ -1.31
SMAD1-208ENST00000510948 V9GY48 417 aaPredicted RBP6.88□□□□□ -1.31
SMAD1-208ENST00000510948 TTC24A2A3L6 582 aaPredicted RBP6.87□□□□□ -1.31
SMAD1-208ENST00000510948 J3QL48 77 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 MEN1O00255 615 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ZNF295-AS1Q8N0V1 137 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 CYP4X1Q8N118 509 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ZDHHC1Q8WTX9 485 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 L3MBTL2Q969R5 705 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 ZNF232Q9UNY5 417 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 HCN4Q9Y3Q4 1203 aa6.87□□□□□ -1.31
SMAD1-208ENST00000510948 FZD6O60353 706 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 GDF9O60383 454 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 TIMP2P16035 220 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 RELBQ01201 579 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
SMAD1-208ENST00000510948 C11orf91Q3C1V1 193 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 EAPPQ56P03 285 aaPredicted RBP6.86□□□□□ -1.31
SMAD1-208ENST00000510948 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 TMC1Q8TDI8 760 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 NGLY1Q96IV0 654 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 ZSCAN10Q96SZ4 725 aaPredicted RBP6.86□□□□□ -1.31
SMAD1-208ENST00000510948 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
SMAD1-208ENST00000510948 ZNF395Q9H8N7 513 aaPredicted RBP6.86□□□□□ -1.31
SMAD1-208ENST00000510948 IGSF5Q9NSI5 407 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 CCDC87Q9NVE4 849 aa6.86□□□□□ -1.31
SMAD1-208ENST00000510948 A0A0G2JS52 829 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 ZBTB39O15060 712 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 RTN1Q16799 776 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 TOR4AQ9NXH8 423 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
SMAD1-208ENST00000510948 TREHO43280 583 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
SMAD1-208ENST00000510948 C1orf53Q5VUE5 145 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 TMEM214Q6NUQ4 689 aaKnown RBP6.84□□□□□ -1.31
SMAD1-208ENST00000510948 RHBDD1Q8TEB9 315 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 GRIP2Q9C0E4 1043 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 PLA2G2EQ9NZK7 142 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 CFTRP13569 1480 aa6.84□□□□□ -1.31
SMAD1-208ENST00000510948 LAMC3Q9Y6N6 1575 aa6.83□□□□□ -1.32
SMAD1-208ENST00000510948 SMPD1P17405 629 aa6.83□□□□□ -1.32
SMAD1-208ENST00000510948 VAMP1P23763 118 aa6.83□□□□□ -1.32
SMAD1-208ENST00000510948 GPC1P35052 558 aa6.83□□□□□ -1.32
SMAD1-208ENST00000510948 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 241.8 ms