RNA–Protein interactions for RNA: ENST00000510072.1

TRIM41-205, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 752 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-205ENST00000510072 CHD4Q14839 1912 aa32.82■■■□□ 2.84
TRIM41-205ENST00000510072 UTRNP46939 3433 aa32.8■■■□□ 2.84
TRIM41-205ENST00000510072 SCN7AQ01118 1682 aa32.79■■■□□ 2.84
TRIM41-205ENST00000510072 FKBP8Q14318 412 aa32.79■■■□□ 2.84
TRIM41-205ENST00000510072 STARD3NLO95772 234 aa32.78■■■□□ 2.84
TRIM41-205ENST00000510072 NEFMP07197 916 aa32.78■■■□□ 2.84
TRIM41-205ENST00000510072 YBX3P16989 372 aaKnown RBP eCLIP32.78■■■□□ 2.84
TRIM41-205ENST00000510072 TEX13AQ9BXU3 409 aaPredicted RBP32.78■■■□□ 2.84
TRIM41-205ENST00000510072 PNNQ9H307 717 aaKnown RBP32.78■■■□□ 2.84
TRIM41-205ENST00000510072 YY1P25490 414 aa32.77■■■□□ 2.84
TRIM41-205ENST00000510072 PXDNLA1KZ92 1463 aa32.77■■■□□ 2.84
TRIM41-205ENST00000510072 EIF5P55010 431 aaKnown RBP32.76■■■□□ 2.83
TRIM41-205ENST00000510072 DDR1Q08345 913 aa32.76■■■□□ 2.83
TRIM41-205ENST00000510072 GPR162Q16538 588 aa32.76■■■□□ 2.83
TRIM41-205ENST00000510072 NARFQ9UHQ1 456 aa32.76■■■□□ 2.83
TRIM41-205ENST00000510072 MAPK8IP3Q9UPT6 1336 aa32.76■■■□□ 2.83
TRIM41-205ENST00000510072 LAMB4A4D0S4 1761 aa32.75■■■□□ 2.83
TRIM41-205ENST00000510072 CANXP27824 592 aaKnown RBP32.74■■■□□ 2.83
TRIM41-205ENST00000510072 TAF7Q15545 349 aaPredicted RBP32.74■■■□□ 2.83
TRIM41-205ENST00000510072 USPL1Q5W0Q7 1092 aa32.74■■■□□ 2.83
TRIM41-205ENST00000510072 BCL2L12Q9HB09 334 aa32.74■■■□□ 2.83
TRIM41-205ENST00000510072 NRXN2Q9P2S2 1712 aa32.74■■■□□ 2.83
TRIM41-205ENST00000510072 N4BP2Q86UW6 1770 aaPredicted RBP32.73■■■□□ 2.83
TRIM41-205ENST00000510072 PRAMEF22A3QJZ6 481 aa32.72■■■□□ 2.83
TRIM41-205ENST00000510072 TM4SF1P30408 202 aa32.72■■■□□ 2.83
TRIM41-205ENST00000510072 THUMPD2Q9BTF0 503 aaKnown RBP32.72■■■□□ 2.83
TRIM41-205ENST00000510072 GOLGB1Q14789 3259 aaKnown RBP32.72■■■□□ 2.83
TRIM41-205ENST00000510072 BCORQ6W2J9 1755 aa32.71■■■□□ 2.83
TRIM41-205ENST00000510072 AFDNP55196 1824 aaKnown RBP32.71■■■□□ 2.83
TRIM41-205ENST00000510072 BRCA1P38398 1863 aaKnown RBP32.71■■■□□ 2.83
TRIM41-205ENST00000510072 ZPR1O75312 459 aa32.7■■■□□ 2.83
TRIM41-205ENST00000510072 PELP1Q8IZL8 1130 aaKnown RBP32.7■■■□□ 2.83
TRIM41-205ENST00000510072 USP16Q9Y5T5 823 aa32.7■■■□□ 2.83
TRIM41-205ENST00000510072 PARP3Q9Y6F1 533 aa32.7■■■□□ 2.83
TRIM41-205ENST00000510072 POLRMTO00411 1230 aaKnown RBP32.69■■■□□ 2.82
TRIM41-205ENST00000510072 IL6STP40189 918 aaPredicted RBP32.69■■■□□ 2.82
TRIM41-205ENST00000510072 A1BGP04217 495 aa32.68■■■□□ 2.82
TRIM41-205ENST00000510072 MIS18AQ9NYP9 233 aa32.68■■■□□ 2.82
TRIM41-205ENST00000510072 SNRPA1P09661 255 aaKnown RBP32.67■■■□□ 2.82
TRIM41-205ENST00000510072 TMPOP42166 694 aaKnown RBP32.67■■■□□ 2.82
TRIM41-205ENST00000510072 NFIXQ14938 502 aa32.65■■■□□ 2.82
TRIM41-205ENST00000510072 A0A087WZG4 1122 aa32.64■■■□□ 2.82
TRIM41-205ENST00000510072 TGFB2P61812 414 aa32.64■■■□□ 2.82
TRIM41-205ENST00000510072 PNISRQ8TF01 805 aaKnown RBP32.64■■■□□ 2.82
TRIM41-205ENST00000510072 ADAMTS8Q9UP79 889 aa32.64■■■□□ 2.82
TRIM41-205ENST00000510072 ZNF316A6NFI3 1004 aaPredicted RBP32.63■■■□□ 2.81
TRIM41-205ENST00000510072 GRIN3BO60391 1043 aa32.63■■■□□ 2.81
TRIM41-205ENST00000510072 RIPK4P57078 832 aa32.63■■■□□ 2.81
TRIM41-205ENST00000510072 CCDC146Q8IYE0 955 aa32.63■■■□□ 2.81
TRIM41-205ENST00000510072 WDR43Q15061 677 aaKnown RBP eCLIP32.62■■■□□ 2.81
TRIM41-205ENST00000510072 RUNDC1Q96C34 613 aa32.61■■■□□ 2.81
TRIM41-205ENST00000510072 EIF4A1P60842 406 aaKnown RBP32.6■■■□□ 2.81
TRIM41-205ENST00000510072 NBPF26B4DH59 902 aa32.59■■■□□ 2.81
TRIM41-205ENST00000510072 PIP4K2AP48426 406 aaPredicted RBP32.59■■■□□ 2.81
TRIM41-205ENST00000510072 NBPF10Q6P3W6 841 aaKnown RBP32.59■■■□□ 2.81
TRIM41-205ENST00000510072 NBPF15Q8N660 670 aa32.59■■■□□ 2.81
TRIM41-205ENST00000510072 A0A0G2JLW4 131 aa32.58■■■□□ 2.81
TRIM41-205ENST00000510072 CAMTA2O94983 1202 aa32.58■■■□□ 2.81
TRIM41-205ENST00000510072 WWC3Q9ULE0 1092 aa32.58■■■□□ 2.81
TRIM41-205ENST00000510072 TBC1D2BQ9UPU7 963 aa32.58■■■□□ 2.81
TRIM41-205ENST00000510072 RRP7AQ9Y3A4 280 aaKnown RBP32.58■■■□□ 2.81
TRIM41-205ENST00000510072 GIGYF1O75420 1035 aaPredicted RBP32.57■■■□□ 2.8
TRIM41-205ENST00000510072 DPEP1P16444 411 aa32.57■■■□□ 2.8
TRIM41-205ENST00000510072 KCNA3P22001 575 aa32.57■■■□□ 2.8
TRIM41-205ENST00000510072 DLEC1Q9Y238 1755 aa32.56■■■□□ 2.8
TRIM41-205ENST00000510072 LMOD3Q0VAK6 560 aa32.56■■■□□ 2.8
TRIM41-205ENST00000510072 TRIM35Q9UPQ4 493 aa32.56■■■□□ 2.8
TRIM41-205ENST00000510072 ZNF330Q9Y3S2 320 aaPredicted RBP32.56■■■□□ 2.8
TRIM41-205ENST00000510072 ARFGEF1Q9Y6D6 1849 aa32.55■■■□□ 2.8
TRIM41-205ENST00000510072 TBC1D9BQ66K14 1250 aa32.54■■■□□ 2.8
TRIM41-205ENST00000510072 ANKRD31Q8N7Z5 1873 aa32.54■■■□□ 2.8
TRIM41-205ENST00000510072 SERPINB2P05120 415 aa32.53■■■□□ 2.8
TRIM41-205ENST00000510072 CARMIL3Q8ND23 1372 aa32.53■■■□□ 2.8
TRIM41-205ENST00000510072 CCDC184Q52MB2 194 aa32.52■■■□□ 2.8
TRIM41-205ENST00000510072 DZIP3Q86Y13 1208 aaKnown RBP32.52■■■□□ 2.8
TRIM41-205ENST00000510072 ZNF784Q8NCA9 323 aaPredicted RBP32.52■■■□□ 2.8
TRIM41-205ENST00000510072 BABAM1Q9NWV8 329 aa32.52■■■□□ 2.8
TRIM41-205ENST00000510072 TSPYL4Q9UJ04 414 aa32.51■■■□□ 2.79
TRIM41-205ENST00000510072 NEUROD2Q15784 382 aa32.49■■■□□ 2.79
TRIM41-205ENST00000510072 BICDL1Q6ZP65 573 aa32.48■■■□□ 2.79
TRIM41-205ENST00000510072 ADCY9O60503 1353 aa32.47■■■□□ 2.79
TRIM41-205ENST00000510072 CHRNA5P30532 468 aa32.47■■■□□ 2.79
TRIM41-205ENST00000510072 COL11A2P13942 1736 aaPredicted RBP32.46■■■□□ 2.79
TRIM41-205ENST00000510072 RGL2O15211 777 aa32.46■■■□□ 2.79
TRIM41-205ENST00000510072 NPM2Q86SE8 214 aaKnown RBP32.45■■■□□ 2.79
TRIM41-205ENST00000510072 BCS1LQ9Y276 419 aa32.45■■■□□ 2.79
TRIM41-205ENST00000510072 CHL1O00533 1208 aa32.44■■■□□ 2.78
TRIM41-205ENST00000510072 PRR5LQ6MZQ0 368 aa32.43■■■□□ 2.78
TRIM41-205ENST00000510072 CLEC4GQ6UXB4 293 aa32.43■■■□□ 2.78
TRIM41-205ENST00000510072 PIM2Q9P1W9 311 aa32.43■■■□□ 2.78
TRIM41-205ENST00000510072 ERBB4Q15303 1308 aa32.42■■■□□ 2.78
TRIM41-205ENST00000510072 APAF1O14727 1248 aa32.4■■■□□ 2.78
TRIM41-205ENST00000510072 LRP10Q7Z4F1 713 aa32.4■■■□□ 2.78
TRIM41-205ENST00000510072 NUP98P52948 1817 aa32.4■■■□□ 2.78
TRIM41-205ENST00000510072 SETDB2Q96T68 719 aa32.39■■■□□ 2.78
TRIM41-205ENST00000510072 ZNF652Q9Y2D9 606 aa32.38■■■□□ 2.77
TRIM41-205ENST00000510072 PDIA6Q15084 440 aa32.37■■■□□ 2.77
TRIM41-205ENST00000510072 HLFQ16534 295 aa32.37■■■□□ 2.77
TRIM41-205ENST00000510072 DALRD3Q5D0E6 543 aaKnown RBP32.37■■■□□ 2.77
TRIM41-205ENST00000510072 ATP10DQ9P241 1426 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms