RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
CCND3-212ENST00000510058 UBR3Q6ZT12 1888 aa25.25■■□□□ 1.63
CCND3-212ENST00000510058 MYH14Q7Z406 1995 aaKnown RBP25.24■■□□□ 1.63
CCND3-212ENST00000510058 ERBB4Q15303 1308 aa25.24■■□□□ 1.63
CCND3-212ENST00000510058 SLC15A2Q16348 729 aa25.24■■□□□ 1.63
CCND3-212ENST00000510058 CRKLP46109 303 aaKnown RBP25.23■■□□□ 1.63
CCND3-212ENST00000510058 CCDC87Q9NVE4 849 aa25.23■■□□□ 1.63
CCND3-212ENST00000510058 USP16Q9Y5T5 823 aa25.23■■□□□ 1.63
CCND3-212ENST00000510058 TUBGCP6Q96RT7 1819 aa25.23■■□□□ 1.63
CCND3-212ENST00000510058 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
CCND3-212ENST00000510058 TRMT2AQ8IZ69 625 aaKnown RBP25.22■■□□□ 1.63
CCND3-212ENST00000510058 FLAD1Q8NFF5 587 aa25.22■■□□□ 1.63
CCND3-212ENST00000510058 ANO8Q9HCE9 1232 aaPredicted RBP25.21■■□□□ 1.63
CCND3-212ENST00000510058 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.62
CCND3-212ENST00000510058 SSFA2P28290 1259 aa25.2■■□□□ 1.62
CCND3-212ENST00000510058 ZNF827Q17R98 1081 aa25.2■■□□□ 1.62
CCND3-212ENST00000510058 CDCA7LQ96GN5 454 aa25.2■■□□□ 1.62
CCND3-212ENST00000510058 TFCP2L1Q9NZI6 479 aa25.2■■□□□ 1.62
CCND3-212ENST00000510058 RTCBQ9Y3I0 505 aaKnown RBP25.2■■□□□ 1.62
CCND3-212ENST00000510058 GNPATO15228 680 aa25.19■■□□□ 1.62
CCND3-212ENST00000510058 RPS6KA4O75676 772 aa25.19■■□□□ 1.62
CCND3-212ENST00000510058 ADRA2BP18089 450 aa25.19■■□□□ 1.62
CCND3-212ENST00000510058 KRT24Q2M2I5 525 aa25.19■■□□□ 1.62
CCND3-212ENST00000510058 TWISTNBQ3B726 338 aaPredicted RBP25.19■■□□□ 1.62
CCND3-212ENST00000510058 INTS5Q6P9B9 1019 aaKnown RBP25.19■■□□□ 1.62
CCND3-212ENST00000510058 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
CCND3-212ENST00000510058 EXOSC9Q06265 439 aaKnown RBP25.18■■□□□ 1.62
CCND3-212ENST00000510058 HDGFL1Q5TGJ6 251 aa25.18■■□□□ 1.62
CCND3-212ENST00000510058 IL6STP40189 918 aaPredicted RBP25.17■■□□□ 1.62
CCND3-212ENST00000510058 NPM2Q86SE8 214 aaKnown RBP25.17■■□□□ 1.62
CCND3-212ENST00000510058 ZBTB1Q9Y2K1 713 aa25.17■■□□□ 1.62
CCND3-212ENST00000510058 CACNA1FO60840 1977 aa25.16■■□□□ 1.62
CCND3-212ENST00000510058 CT47B1P0C2W7 299 aaPredicted RBP25.16■■□□□ 1.62
CCND3-212ENST00000510058 EIF2S2P20042 333 aaKnown RBP25.16■■□□□ 1.62
CCND3-212ENST00000510058 ELL2O00472 640 aaPredicted RBP25.15■■□□□ 1.62
CCND3-212ENST00000510058 CCDC30Q5VVM6 783 aa25.15■■□□□ 1.62
CCND3-212ENST00000510058 ZNF428Q96B54 188 aa25.15■■□□□ 1.62
CCND3-212ENST00000510058 A1BGP04217 495 aa25.14■■□□□ 1.62
CCND3-212ENST00000510058 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
CCND3-212ENST00000510058 TSPYL6Q8N831 410 aa25.14■■□□□ 1.62
CCND3-212ENST00000510058 DBF4Q9UBU7 674 aaPredicted RBP25.14■■□□□ 1.62
CCND3-212ENST00000510058 C4AP0C0L4 1744 aa25.14■■□□□ 1.61
CCND3-212ENST00000510058 A0A087WZG4 1122 aa25.13■■□□□ 1.61
CCND3-212ENST00000510058 TRAPPC3LQ5T215 181 aa25.13■■□□□ 1.61
CCND3-212ENST00000510058 COL15A1P39059 1388 aa25.13■■□□□ 1.61
CCND3-212ENST00000510058 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
CCND3-212ENST00000510058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.12■■□□□ 1.61
CCND3-212ENST00000510058 VAMP4O75379 141 aa25.12■■□□□ 1.61
CCND3-212ENST00000510058 EIF5P55010 431 aaKnown RBP25.12■■□□□ 1.61
CCND3-212ENST00000510058 DDX21Q9NR30 783 aaKnown RBP eCLIP25.12■■□□□ 1.61
CCND3-212ENST00000510058 CASZ1Q86V15 1759 aa25.12■■□□□ 1.61
CCND3-212ENST00000510058 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
CCND3-212ENST00000510058 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
CCND3-212ENST00000510058 STK31Q9BXU1 1019 aa25.11■■□□□ 1.61
CCND3-212ENST00000510058 NBPF26B4DH59 902 aa25.1■■□□□ 1.61
CCND3-212ENST00000510058 NBPF10Q6P3W6 841 aaKnown RBP25.1■■□□□ 1.61
CCND3-212ENST00000510058 NBPF15Q8N660 670 aa25.1■■□□□ 1.61
CCND3-212ENST00000510058 PHF14O94880 888 aa25.09■■□□□ 1.61
CCND3-212ENST00000510058 SLC16A10Q8TF71 515 aa25.09■■□□□ 1.61
CCND3-212ENST00000510058 HYPKQ9NX55 129 aa25.09■■□□□ 1.61
CCND3-212ENST00000510058 RFC4P35249 363 aa25.08■■□□□ 1.61
CCND3-212ENST00000510058 PDIA6Q15084 440 aa25.08■■□□□ 1.61
CCND3-212ENST00000510058 CHPF2Q9P2E5 772 aa25.08■■□□□ 1.61
CCND3-212ENST00000510058 NECTIN2Q92692 538 aa25.07■■□□□ 1.6
CCND3-212ENST00000510058 ARHGEF1Q92888 912 aaKnown RBP25.07■■□□□ 1.6
CCND3-212ENST00000510058 BCORQ6W2J9 1755 aa25.07■■□□□ 1.6
CCND3-212ENST00000510058 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
CCND3-212ENST00000510058 RGL2O15211 777 aa25.06■■□□□ 1.6
CCND3-212ENST00000510058 MYL6BP14649 208 aa25.06■■□□□ 1.6
CCND3-212ENST00000510058 COL23A1Q86Y22 540 aaPredicted RBP25.06■■□□□ 1.6
CCND3-212ENST00000510058 ZNF330Q9Y3S2 320 aaPredicted RBP25.06■■□□□ 1.6
CCND3-212ENST00000510058 AMIGO3Q86WK7 504 aa25.05■■□□□ 1.6
CCND3-212ENST00000510058 NARFQ9UHQ1 456 aa25.05■■□□□ 1.6
CCND3-212ENST00000510058 USP42Q9H9J4 1324 aaKnown RBP25.05■■□□□ 1.6
CCND3-212ENST00000510058 MSH5O43196 834 aa25.04■■□□□ 1.6
CCND3-212ENST00000510058 ZPR1O75312 459 aa25.04■■□□□ 1.6
CCND3-212ENST00000510058 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
CCND3-212ENST00000510058 LRP10Q7Z4F1 713 aa25.04■■□□□ 1.6
CCND3-212ENST00000510058 PSDA5PKW4 1024 aaPredicted RBP25.03■■□□□ 1.6
CCND3-212ENST00000510058 ALDH1L2Q3SY69 923 aa25.03■■□□□ 1.6
CCND3-212ENST00000510058 KIF6Q6ZMV9 814 aa25.03■■□□□ 1.6
CCND3-212ENST00000510058 DZIP3Q86Y13 1208 aaKnown RBP25.03■■□□□ 1.6
CCND3-212ENST00000510058 PROSER3Q2NL68 480 aa25.02■■□□□ 1.6
CCND3-212ENST00000510058 COL24A1Q17RW2 1714 aa25.01■■□□□ 1.59
CCND3-212ENST00000510058 ERVV-1B6SEH8 477 aa25■■□□□ 1.59
CCND3-212ENST00000510058 SLC4A2P04920 1241 aa25■■□□□ 1.59
CCND3-212ENST00000510058 MTFR1LQ9H019 292 aa25■■□□□ 1.59
CCND3-212ENST00000510058 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
CCND3-212ENST00000510058 ANXA1P04083 346 aa24.99■■□□□ 1.59
CCND3-212ENST00000510058 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
CCND3-212ENST00000510058 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
CCND3-212ENST00000510058 COPS6Q7L5N1 327 aa24.99■■□□□ 1.59
CCND3-212ENST00000510058 DDX58O95786 925 aaKnown RBP24.98■■□□□ 1.59
CCND3-212ENST00000510058 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
CCND3-212ENST00000510058 NLGN1Q8N2Q7 840 aa24.98■■□□□ 1.59
CCND3-212ENST00000510058 XAGE3Q8WTP9 111 aa24.98■■□□□ 1.59
CCND3-212ENST00000510058 ARXQ96QS3 562 aa24.98■■□□□ 1.59
CCND3-212ENST00000510058 TBC1D2BQ9UPU7 963 aa24.98■■□□□ 1.59
CCND3-212ENST00000510058 CAMTA2O94983 1202 aa24.97■■□□□ 1.59
CCND3-212ENST00000510058 USPL1Q5W0Q7 1092 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms