RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 SSFA2P28290 1259 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 APLP1P51693 650 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 GRIPAP1Q4V328 841 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 SCUBE3Q8IX30 993 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 RAB15P59190 212 aa7.42□□□□□ -1.22
NEK1-204ENST00000509912 LYPD8Q6UX82 237 aa7.42□□□□□ -1.22
NEK1-204ENST00000509912 VPS9D1Q9Y2B5 631 aa7.42□□□□□ -1.22
NEK1-204ENST00000509912 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
NEK1-204ENST00000509912 USB1Q9BQ65 265 aaKnown RBP7.42□□□□□ -1.22
NEK1-204ENST00000509912 NHSL1Q5SYE7 1610 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 HNRNPMP52272 730 aaKnown RBP eCLIP7.41□□□□□ -1.22
NEK1-204ENST00000509912 DNAJC14Q6Y2X3 702 aaPredicted RBP7.41□□□□□ -1.22
NEK1-204ENST00000509912 ANKLE2Q86XL3 938 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 MST1RQ04912 1400 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 COPS2P61201 443 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 PURBQ96QR8 312 aaKnown RBP7.41□□□□□ -1.22
NEK1-204ENST00000509912 CEP126Q9P2H0 1117 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 NRXN1Q9ULB1 1477 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 NRXN3Q9Y4C0 1643 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 ERBB3P21860 1342 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 TLL1O43897 1013 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 SEPT3Q9UH03 358 aa7.41□□□□□ -1.22
NEK1-204ENST00000509912 TECPR2O15040 1411 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 PTCH1Q13635 1447 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 KIAA1210Q9ULL0 1709 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 PSDA5PKW4 1024 aaPredicted RBP7.4□□□□□ -1.22
NEK1-204ENST00000509912 PDE4CQ08493 712 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 SLFNL1Q499Z3 407 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 PLPP7Q8NBV4 271 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 CDCA7Q9BWT1 371 aaPredicted RBP7.4□□□□□ -1.22
NEK1-204ENST00000509912 SCUBE2Q9NQ36 999 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 DLC1Q96QB1 1528 aa7.4□□□□□ -1.22
NEK1-204ENST00000509912 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.23
NEK1-204ENST00000509912 ILDR2Q71H61 639 aa7.4□□□□□ -1.23
NEK1-204ENST00000509912 ADAM32Q8TC27 787 aa7.4□□□□□ -1.23
NEK1-204ENST00000509912 TBX22Q9Y458 520 aa7.4□□□□□ -1.23
NEK1-204ENST00000509912 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 ANKRD50Q9ULJ7 1429 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
NEK1-204ENST00000509912 SOX11P35716 441 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 CCER1Q8TC90 406 aaPredicted RBP7.39□□□□□ -1.23
NEK1-204ENST00000509912 FAM200AQ8TCP9 573 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 GNEQ9Y223 722 aaKnown RBP7.39□□□□□ -1.23
NEK1-204ENST00000509912 FAM205CA6NFA0 338 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 SFI1A8K8P3 1242 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 BCL2L13Q9BXK5 485 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 KIF1BO60333 1816 aa7.39□□□□□ -1.23
NEK1-204ENST00000509912 PNMA1Q8ND90 353 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 SP7Q8TDD2 431 aaPredicted RBP7.38□□□□□ -1.23
NEK1-204ENST00000509912 ADGRB2O60241 1585 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 PPLO60437 1756 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 ZNF335Q9H4Z2 1342 aaPredicted RBP7.38□□□□□ -1.23
NEK1-204ENST00000509912 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
NEK1-204ENST00000509912 H3BRB1 525 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 KCNA6P17658 529 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 GGT6Q6P531 493 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
NEK1-204ENST00000509912 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
NEK1-204ENST00000509912 NEXMIFQ5QGS0 1516 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 MYOM2P54296 1465 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 FAM196BA6NMK8 535 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 MARSP56192 900 aaKnown RBP7.37□□□□□ -1.23
NEK1-204ENST00000509912 ANKMY2Q8IV38 441 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 SOWAHDA6NJG2 315 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 UBAP1LF5GYI3 381 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 PSME1Q06323 249 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 TPCN2Q8NHX9 752 aa7.37□□□□□ -1.23
NEK1-204ENST00000509912 KIF1AQ12756 1690 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 KMT5BQ4FZB7 885 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 PTCRAQ6ISU1 281 aaPredicted RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 BRICD5Q6PL45 260 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 LRCH3Q96II8 777 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 CCDC85AQ96PX6 553 aaPredicted RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 MED1Q15648 1581 aaPredicted RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 NAA30Q147X3 362 aaPredicted RBP7.36□□□□□ -1.23
NEK1-204ENST00000509912 CDC42BPGQ6DT37 1551 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 WASHC2CQ9Y4E1 1318 aa7.36□□□□□ -1.23
NEK1-204ENST00000509912 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
NEK1-204ENST00000509912 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.35□□□□□ -1.23
NEK1-204ENST00000509912 PPP1R1BQ9UD71 204 aaPredicted RBP7.35□□□□□ -1.23
NEK1-204ENST00000509912 ACTN4O43707 911 aaKnown RBP7.35□□□□□ -1.23
NEK1-204ENST00000509912 SLC4A3P48751 1232 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 C9orf131Q5VYM1 1079 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 AMOTL2Q9Y2J4 779 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 PCDHB3Q9Y5E6 796 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 TSEN2Q8NCE0 465 aaKnown RBP7.35□□□□□ -1.23
NEK1-204ENST00000509912 HPS5Q9UPZ3 1129 aa7.35□□□□□ -1.23
NEK1-204ENST00000509912 COL16A1Q07092 1604 aaPredicted RBP7.34□□□□□ -1.23
NEK1-204ENST00000509912 ADAMTS13Q76LX8 1427 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 FAM160A2Q8N612 972 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms