RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 SLC15A2Q16348 729 aa9.29□□□□□ -0.92
CLGN-203ENST00000509477 NGDNQ8NEJ9 315 aaKnown RBP9.29□□□□□ -0.92
CLGN-203ENST00000509477 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
CLGN-203ENST00000509477 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
CLGN-203ENST00000509477 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
CLGN-203ENST00000509477 RGPD3A6NKT7 1758 aaPredicted RBP9.29□□□□□ -0.92
CLGN-203ENST00000509477 RGPD4Q7Z3J3 1758 aa9.29□□□□□ -0.92
CLGN-203ENST00000509477 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
CLGN-203ENST00000509477 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
CLGN-203ENST00000509477 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
CLGN-203ENST00000509477 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
CLGN-203ENST00000509477 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
CLGN-203ENST00000509477 POGKQ9P215 609 aa9.28□□□□□ -0.92
CLGN-203ENST00000509477 SSH2Q76I76 1423 aa9.28□□□□□ -0.92
CLGN-203ENST00000509477 YTHDC2Q9H6S0 1430 aaKnown RBP9.28□□□□□ -0.92
CLGN-203ENST00000509477 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
CLGN-203ENST00000509477 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
CLGN-203ENST00000509477 RGL3Q3MIN7 710 aa9.27□□□□□ -0.93
CLGN-203ENST00000509477 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
CLGN-203ENST00000509477 THRAP3Q9Y2W1 955 aaKnown RBP9.27□□□□□ -0.93
CLGN-203ENST00000509477 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
CLGN-203ENST00000509477 ANKARQ7Z5J8 1434 aa9.26□□□□□ -0.93
CLGN-203ENST00000509477 LOC105371045A0A1W2PR82 267 aa9.26□□□□□ -0.93
CLGN-203ENST00000509477 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
CLGN-203ENST00000509477 NUTM2GQ5VZR2 741 aa9.26□□□□□ -0.93
CLGN-203ENST00000509477 ZNF526Q8TF50 670 aaPredicted RBP9.26□□□□□ -0.93
CLGN-203ENST00000509477 PRAM1Q96QH2 718 aa9.26□□□□□ -0.93
CLGN-203ENST00000509477 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
CLGN-203ENST00000509477 POLD1P28340 1107 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 DDB1Q16531 1140 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 LAPTM4BQ86VI4 370 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 SULF1Q8IWU6 871 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
CLGN-203ENST00000509477 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
CLGN-203ENST00000509477 ATP10DQ9P241 1426 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 ZBTB7CA1YPR0 619 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 GRIN3BO60391 1043 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 SIRT1Q96EB6 747 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 BEGAINQ9BUH8 593 aa9.24□□□□□ -0.93
CLGN-203ENST00000509477 HIRIP3Q9BW71 556 aaPredicted RBP9.24□□□□□ -0.93
CLGN-203ENST00000509477 PARP4Q9UKK3 1724 aaKnown RBP9.24□□□□□ -0.93
CLGN-203ENST00000509477 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
CLGN-203ENST00000509477 DHX57Q6P158 1386 aaKnown RBP9.24□□□□□ -0.93
CLGN-203ENST00000509477 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
CLGN-203ENST00000509477 SWT1Q5T5J6 900 aaKnown RBP9.23□□□□□ -0.93
CLGN-203ENST00000509477 PTF1AQ7RTS3 328 aa9.23□□□□□ -0.93
CLGN-203ENST00000509477 ANKRD30BQ9BXX2 1392 aa9.23□□□□□ -0.93
CLGN-203ENST00000509477 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
CLGN-203ENST00000509477 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
CLGN-203ENST00000509477 APLP1P51693 650 aa9.21□□□□□ -0.94
CLGN-203ENST00000509477 NPM2Q86SE8 214 aaKnown RBP9.21□□□□□ -0.94
CLGN-203ENST00000509477 RDH13Q8NBN7 331 aa9.21□□□□□ -0.94
CLGN-203ENST00000509477 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
CLGN-203ENST00000509477 SBF2Q86WG5 1849 aa9.21□□□□□ -0.94
CLGN-203ENST00000509477 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
CLGN-203ENST00000509477 ATP7BP35670 1465 aa9.21□□□□□ -0.94
CLGN-203ENST00000509477 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 PEAK1Q9H792 1746 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 COL13A1Q5TAT6 717 aaPredicted RBP9.2□□□□□ -0.94
CLGN-203ENST00000509477 TOM1L2Q6ZVM7 507 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 NLGN2Q8NFZ4 835 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 CRB1P82279 1406 aa9.2□□□□□ -0.94
CLGN-203ENST00000509477 CD46P15529 392 aa9.19□□□□□ -0.94
CLGN-203ENST00000509477 PRELPP51888 382 aa9.19□□□□□ -0.94
CLGN-203ENST00000509477 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
CLGN-203ENST00000509477 TULP4Q9NRJ4 1543 aa9.19□□□□□ -0.94
CLGN-203ENST00000509477 TOPAZ1Q8N9V7 1692 aa9.19□□□□□ -0.94
CLGN-203ENST00000509477 COL5A2P05997 1499 aaPredicted RBP9.18□□□□□ -0.94
CLGN-203ENST00000509477 YBX3P16989 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLGN-203ENST00000509477 CFAP70Q5T0N1 1121 aa9.18□□□□□ -0.94
CLGN-203ENST00000509477 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
CLGN-203ENST00000509477 PRR36Q9H6K5 1346 aa9.18□□□□□ -0.94
CLGN-203ENST00000509477 AKAP12Q02952 1782 aa9.17□□□□□ -0.94
CLGN-203ENST00000509477 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
CLGN-203ENST00000509477 RNF40O75150 1001 aa9.17□□□□□ -0.94
CLGN-203ENST00000509477 MARCH10Q8NA82 808 aaPredicted RBP9.17□□□□□ -0.94
CLGN-203ENST00000509477 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
CLGN-203ENST00000509477 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
CLGN-203ENST00000509477 ARID3AQ99856 593 aa9.17□□□□□ -0.94
CLGN-203ENST00000509477 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
CLGN-203ENST00000509477 LMO7Q8WWI1 1683 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 CPDO75976 1380 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 DIXDC1Q155Q3 683 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
CLGN-203ENST00000509477 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 TRAK1Q9UPV9 953 aa9.16□□□□□ -0.94
CLGN-203ENST00000509477 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
CLGN-203ENST00000509477 ITSN1Q15811 1721 aa9.15□□□□□ -0.94
CLGN-203ENST00000509477 EXOC5O00471 708 aa9.15□□□□□ -0.94
CLGN-203ENST00000509477 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
CLGN-203ENST00000509477 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.94
CLGN-203ENST00000509477 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
CLGN-203ENST00000509477 AATKQ6ZMQ8 1374 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms