RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HCN2Q9UL51 889 aa8.52□□□□□ -1.05
NIPBL-206ENST00000509429 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
NIPBL-206ENST00000509429 M0R082 166 aa8.51□□□□□ -1.05
NIPBL-206ENST00000509429 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-206ENST00000509429 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-206ENST00000509429 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
NIPBL-206ENST00000509429 LENG1Q96BZ8 264 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-206ENST00000509429 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-206ENST00000509429 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
NIPBL-206ENST00000509429 MAPTP10636 758 aaKnown RBP8.5□□□□□ -1.05
NIPBL-206ENST00000509429 SSTR4P31391 388 aa8.5□□□□□ -1.05
NIPBL-206ENST00000509429 TNP2Q05952 138 aa8.5□□□□□ -1.05
NIPBL-206ENST00000509429 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
NIPBL-206ENST00000509429 NLRP8Q86W28 1048 aa8.5□□□□□ -1.05
NIPBL-206ENST00000509429 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
NIPBL-206ENST00000509429 TRAK2O60296 914 aa8.49□□□□□ -1.05
NIPBL-206ENST00000509429 IL2RAP01589 272 aa8.48□□□□□ -1.05
NIPBL-206ENST00000509429 MDFIQ99750 246 aa8.48□□□□□ -1.05
NIPBL-206ENST00000509429 OSBPL3Q9H4L5 887 aa8.48□□□□□ -1.05
NIPBL-206ENST00000509429 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 GNRH1P01148 92 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 NID1P14543 1247 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 SCTRP47872 440 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 CD97P48960 835 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 GP2P55259 537 aaKnown RBP8.47□□□□□ -1.05
NIPBL-206ENST00000509429 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 HRH3Q9Y5N1 445 aa8.47□□□□□ -1.05
NIPBL-206ENST00000509429 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
NIPBL-206ENST00000509429 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-206ENST00000509429 KHNYNO15037 678 aaKnown RBP8.44□□□□□ -1.06
NIPBL-206ENST00000509429 TRAPPC3LQ5T215 181 aa8.44□□□□□ -1.06
NIPBL-206ENST00000509429 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
NIPBL-206ENST00000509429 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
NIPBL-206ENST00000509429 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
NIPBL-206ENST00000509429 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
NIPBL-206ENST00000509429 PARP9Q8IXQ6 854 aa8.43□□□□□ -1.06
NIPBL-206ENST00000509429 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-206ENST00000509429 ADARB2-AS1A8MUL3 147 aa8.42□□□□□ -1.06
NIPBL-206ENST00000509429 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
NIPBL-206ENST00000509429 RHBDD1Q8TEB9 315 aa8.42□□□□□ -1.06
NIPBL-206ENST00000509429 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
NIPBL-206ENST00000509429 ALBP02768 609 aa8.41□□□□□ -1.06
NIPBL-206ENST00000509429 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
NIPBL-206ENST00000509429 SYT9Q86SS6 491 aa8.41□□□□□ -1.06
NIPBL-206ENST00000509429 C1orf216Q8TAB5 229 aa8.41□□□□□ -1.06
NIPBL-206ENST00000509429 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
NIPBL-206ENST00000509429 A0A0A0MRY4 1105 aa8.4□□□□□ -1.06
NIPBL-206ENST00000509429 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
NIPBL-206ENST00000509429 USP21Q9UK80 565 aa8.4□□□□□ -1.06
NIPBL-206ENST00000509429 SIN3BO75182 1162 aa8.38□□□□□ -1.07
NIPBL-206ENST00000509429 MARK1Q9P0L2 795 aa8.38□□□□□ -1.07
NIPBL-206ENST00000509429 FAM157BP0CG42 384 aa8.37□□□□□ -1.07
NIPBL-206ENST00000509429 ATP4AP20648 1035 aa8.37□□□□□ -1.07
NIPBL-206ENST00000509429 RAC1P63000 192 aa8.37□□□□□ -1.07
NIPBL-206ENST00000509429 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
NIPBL-206ENST00000509429 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
NIPBL-206ENST00000509429 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
NIPBL-206ENST00000509429 A0A1W2PNR3 127 aa8.36□□□□□ -1.07
NIPBL-206ENST00000509429 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-206ENST00000509429 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
NIPBL-206ENST00000509429 PCDHB11Q9Y5F2 797 aa8.36□□□□□ -1.07
NIPBL-206ENST00000509429 MED26O95402 600 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 C8AP07357 584 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 FSTP19883 344 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 PLA2G4AP47712 749 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 OGFOD2Q6N063 350 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
NIPBL-206ENST00000509429 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
NIPBL-206ENST00000509429 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-206ENST00000509429 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
NIPBL-206ENST00000509429 LILRB5O75023 590 aa8.31□□□□□ -1.08
NIPBL-206ENST00000509429 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
NIPBL-206ENST00000509429 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-206ENST00000509429 EFSO43281 561 aa8.3□□□□□ -1.08
NIPBL-206ENST00000509429 FBLN7Q53RD9 439 aa8.3□□□□□ -1.08
NIPBL-206ENST00000509429 AIDAQ96BJ3 306 aa8.3□□□□□ -1.08
NIPBL-206ENST00000509429 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
NIPBL-206ENST00000509429 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-206ENST00000509429 KRTAP9-8Q9BYQ0 159 aa8.29□□□□□ -1.08
NIPBL-206ENST00000509429 ADH7P40394 386 aa8.28□□□□□ -1.08
NIPBL-206ENST00000509429 IREB2P48200 963 aaKnown RBP8.28□□□□□ -1.08
NIPBL-206ENST00000509429 SAMD5Q5TGI4 173 aa8.28□□□□□ -1.08
NIPBL-206ENST00000509429 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-206ENST00000509429 POLR3EQ9NVU0 708 aa8.28□□□□□ -1.08
NIPBL-206ENST00000509429 POU5F2Q8N7G0 328 aa8.27□□□□□ -1.09
NIPBL-206ENST00000509429 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.09
NIPBL-206ENST00000509429 ZBBXA8MT70 800 aa8.26□□□□□ -1.09
NIPBL-206ENST00000509429 ADAMTS4O75173 837 aa8.26□□□□□ -1.09
NIPBL-206ENST00000509429 NOS3P29474 1203 aa8.26□□□□□ -1.09
NIPBL-206ENST00000509429 TLR1Q15399 786 aa8.26□□□□□ -1.09
NIPBL-206ENST00000509429 MYCP01106 439 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-206ENST00000509429 MEGF10Q96KG7 1140 aa8.25□□□□□ -1.09
NIPBL-206ENST00000509429 RSPH6AQ9H0K4 717 aa8.25□□□□□ -1.09
NIPBL-206ENST00000509429 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-206ENST00000509429 ADGRE2Q9UHX3 823 aa8.25□□□□□ -1.09
NIPBL-206ENST00000509429 KRTAP9-7A8MTY7 169 aa8.23□□□□□ -1.09
NIPBL-206ENST00000509429 ZMYND10O75800 440 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms