RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 CRKLP46109 303 aaKnown RBP19.11■□□□□ 0.65
RNF4-213ENST00000509388 RC3H1Q5TC82 1133 aaKnown RBP19.11■□□□□ 0.65
RNF4-213ENST00000509388 TSPYL6Q8N831 410 aa19.11■□□□□ 0.65
RNF4-213ENST00000509388 TFCP2L1Q9NZI6 479 aa19.11■□□□□ 0.65
RNF4-213ENST00000509388 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 GNPATO15228 680 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 A1BGP04217 495 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 RTCBQ9Y3I0 505 aaKnown RBP19.1■□□□□ 0.65
RNF4-213ENST00000509388 RGPD3A6NKT7 1758 aaPredicted RBP19.1■□□□□ 0.65
RNF4-213ENST00000509388 RGPD4Q7Z3J3 1758 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 LY75O60449 1722 aa19.1■□□□□ 0.65
RNF4-213ENST00000509388 SLC15A2Q16348 729 aa19.09■□□□□ 0.65
RNF4-213ENST00000509388 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
RNF4-213ENST00000509388 ZNF330Q9Y3S2 320 aaPredicted RBP19.09■□□□□ 0.65
RNF4-213ENST00000509388 UBR2Q8IWV8 1755 aa19.09■□□□□ 0.65
RNF4-213ENST00000509388 VAMP4O75379 141 aa19.08■□□□□ 0.64
RNF4-213ENST00000509388 INTS5Q6P9B9 1019 aaKnown RBP19.08■□□□□ 0.64
RNF4-213ENST00000509388 AKT1S1Q96B36 256 aa19.08■□□□□ 0.64
RNF4-213ENST00000509388 ZBTB1Q9Y2K1 713 aa19.08■□□□□ 0.64
RNF4-213ENST00000509388 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
RNF4-213ENST00000509388 RPS6KA4O75676 772 aa19.07■□□□□ 0.64
RNF4-213ENST00000509388 ARXQ96QS3 562 aa19.07■□□□□ 0.64
RNF4-213ENST00000509388 DBF4Q9UBU7 674 aaPredicted RBP19.07■□□□□ 0.64
RNF4-213ENST00000509388 MSH5O43196 834 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 PHF14O94880 888 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
RNF4-213ENST00000509388 MYL6BP14649 208 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 TRAPPC3LQ5T215 181 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 FLAD1Q8NFF5 587 aa19.06■□□□□ 0.64
RNF4-213ENST00000509388 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
RNF4-213ENST00000509388 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
RNF4-213ENST00000509388 PIP4K2AP48426 406 aaPredicted RBP19.05■□□□□ 0.64
RNF4-213ENST00000509388 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
RNF4-213ENST00000509388 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
RNF4-213ENST00000509388 A0A087WZG4 1122 aa19.04■□□□□ 0.64
RNF4-213ENST00000509388 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
RNF4-213ENST00000509388 SSFA2P28290 1259 aa19.04■□□□□ 0.64
RNF4-213ENST00000509388 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
RNF4-213ENST00000509388 DDX21Q9NR30 783 aaKnown RBP eCLIP19.04■□□□□ 0.64
RNF4-213ENST00000509388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.03■□□□□ 0.64
RNF4-213ENST00000509388 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 ADRA2BP18089 450 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 RFC4P35249 363 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
RNF4-213ENST00000509388 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 HYPKQ9NX55 129 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 TJP1Q07157 1748 aa19.03■□□□□ 0.64
RNF4-213ENST00000509388 ANXA1P04083 346 aa19.02■□□□□ 0.64
RNF4-213ENST00000509388 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
RNF4-213ENST00000509388 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.64
RNF4-213ENST00000509388 C4BP0C0L5 1744 aa19.02■□□□□ 0.63
RNF4-213ENST00000509388 C5P01031 1676 aa19.01■□□□□ 0.63
RNF4-213ENST00000509388 RREB1Q92766 1687 aa19.01■□□□□ 0.63
RNF4-213ENST00000509388 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
RNF4-213ENST00000509388 ZPR1O75312 459 aa19■□□□□ 0.63
RNF4-213ENST00000509388 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
RNF4-213ENST00000509388 PDIA6Q15084 440 aa19■□□□□ 0.63
RNF4-213ENST00000509388 PROSER3Q2NL68 480 aa19■□□□□ 0.63
RNF4-213ENST00000509388 KIF6Q6ZMV9 814 aa19■□□□□ 0.63
RNF4-213ENST00000509388 SMIM5Q71RC9 77 aa19■□□□□ 0.63
RNF4-213ENST00000509388 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
RNF4-213ENST00000509388 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
RNF4-213ENST00000509388 COL15A1P39059 1388 aa18.99■□□□□ 0.63
RNF4-213ENST00000509388 ALDH1L2Q3SY69 923 aa18.99■□□□□ 0.63
RNF4-213ENST00000509388 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
RNF4-213ENST00000509388 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
RNF4-213ENST00000509388 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
RNF4-213ENST00000509388 PNPLA7Q6ZV29 1317 aa18.99■□□□□ 0.63
RNF4-213ENST00000509388 PSDA5PKW4 1024 aaPredicted RBP18.98■□□□□ 0.63
RNF4-213ENST00000509388 COPS6Q7L5N1 327 aa18.98■□□□□ 0.63
RNF4-213ENST00000509388 COL23A1Q86Y22 540 aaPredicted RBP18.98■□□□□ 0.63
RNF4-213ENST00000509388 XAGE3Q8WTP9 111 aa18.98■□□□□ 0.63
RNF4-213ENST00000509388 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
RNF4-213ENST00000509388 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
RNF4-213ENST00000509388 AMIGO3Q86WK7 504 aa18.97■□□□□ 0.63
RNF4-213ENST00000509388 SSH1Q8WYL5 1049 aa18.97■□□□□ 0.63
RNF4-213ENST00000509388 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
RNF4-213ENST00000509388 TAF1LQ8IZX4 1826 aa18.97■□□□□ 0.63
RNF4-213ENST00000509388 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
RNF4-213ENST00000509388 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
RNF4-213ENST00000509388 RARSP54136 660 aaKnown RBP18.96■□□□□ 0.63
RNF4-213ENST00000509388 PHAXQ9H814 394 aaKnown RBP18.96■□□□□ 0.63
RNF4-213ENST00000509388 NARFQ9UHQ1 456 aa18.96■□□□□ 0.63
RNF4-213ENST00000509388 FLIIQ13045 1269 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 USPL1Q5W0Q7 1092 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 TTLL7Q6ZT98 887 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 ANKRD13DQ6ZTN6 518 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 LRP10Q7Z4F1 713 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 MRPL50Q8N5N7 158 aaKnown RBP18.94■□□□□ 0.62
RNF4-213ENST00000509388 SRP68Q9UHB9 627 aaKnown RBP18.94■□□□□ 0.62
RNF4-213ENST00000509388 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
RNF4-213ENST00000509388 FKBP5Q13451 457 aaPredicted RBP18.93■□□□□ 0.62
RNF4-213ENST00000509388 G2E3Q7L622 706 aa18.93■□□□□ 0.62
RNF4-213ENST00000509388 RIC3Q7Z5B4 369 aa18.93■□□□□ 0.62
RNF4-213ENST00000509388 SLC16A10Q8TF71 515 aa18.93■□□□□ 0.62
RNF4-213ENST00000509388 ZBTB3Q9H5J0 574 aa18.93■□□□□ 0.62
RNF4-213ENST00000509388 RCAN3Q9UKA8 241 aa18.93■□□□□ 0.62
RNF4-213ENST00000509388 MAP3K15Q6ZN16 1313 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms