RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 BCAR3O75815 825 aa18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 APBA3O96018 575 aa18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 TJP1Q07157 1748 aa18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 TNS1Q9HBL0 1735 aaKnown RBP18.34■□□□□ 0.53
SPOCK1-206ENST00000509293 SLC4A2P04920 1241 aa18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 ITPK1Q13572 414 aa18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 PDIA6Q15084 440 aa18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 CHPF2Q9P2E5 772 aa18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
SPOCK1-206ENST00000509293 IPO8O15397 1037 aaKnown RBP18.32■□□□□ 0.52
SPOCK1-206ENST00000509293 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
SPOCK1-206ENST00000509293 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
SPOCK1-206ENST00000509293 PTPRCP08575 1304 aa18.31■□□□□ 0.52
SPOCK1-206ENST00000509293 CNTNAP4Q9C0A0 1308 aa18.31■□□□□ 0.52
SPOCK1-206ENST00000509293 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
SPOCK1-206ENST00000509293 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
SPOCK1-206ENST00000509293 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
SPOCK1-206ENST00000509293 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
SPOCK1-206ENST00000509293 LRP10Q7Z4F1 713 aa18.3■□□□□ 0.52
SPOCK1-206ENST00000509293 EP400Q96L91 3159 aa18.3■□□□□ 0.52
SPOCK1-206ENST00000509293 COL5A3P25940 1745 aaPredicted RBP18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 RREB1Q92766 1687 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 A1BGP04217 495 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 NBPF14Q5TI25 921 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 CCDC87Q9NVE4 849 aa18.29■□□□□ 0.52
SPOCK1-206ENST00000509293 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 FLIIQ13045 1269 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 PROSER3Q2NL68 480 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 PROM2Q8N271 834 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
SPOCK1-206ENST00000509293 MS4A1P11836 297 aa18.27■□□□□ 0.52
SPOCK1-206ENST00000509293 BAG6P46379 1132 aa18.27■□□□□ 0.52
SPOCK1-206ENST00000509293 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
SPOCK1-206ENST00000509293 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
SPOCK1-206ENST00000509293 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
SPOCK1-206ENST00000509293 TAF1LQ8IZX4 1826 aa18.26■□□□□ 0.51
SPOCK1-206ENST00000509293 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
SPOCK1-206ENST00000509293 G2E3Q7L622 706 aa18.26■□□□□ 0.51
SPOCK1-206ENST00000509293 EIF5P55010 431 aaKnown RBP18.25■□□□□ 0.51
SPOCK1-206ENST00000509293 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
SPOCK1-206ENST00000509293 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
SPOCK1-206ENST00000509293 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
SPOCK1-206ENST00000509293 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 ANXA1P04083 346 aa18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 TRIM27P14373 513 aa18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 MYL6BP14649 208 aa18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 KCNQ4P56696 695 aa18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
SPOCK1-206ENST00000509293 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
SPOCK1-206ENST00000509293 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
SPOCK1-206ENST00000509293 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
SPOCK1-206ENST00000509293 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
SPOCK1-206ENST00000509293 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
SPOCK1-206ENST00000509293 A0A087WZG4 1122 aa18.22■□□□□ 0.51
SPOCK1-206ENST00000509293 RGL2O15211 777 aa18.22■□□□□ 0.51
SPOCK1-206ENST00000509293 PLIN1O60240 522 aa18.22■□□□□ 0.51
SPOCK1-206ENST00000509293 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
SPOCK1-206ENST00000509293 ABCC4O15439 1325 aa18.22■□□□□ 0.51
SPOCK1-206ENST00000509293 ADRA2BP18089 450 aa18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 ANKRD13DQ6ZTN6 518 aa18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 NPM2Q86SE8 214 aaKnown RBP18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
SPOCK1-206ENST00000509293 AK7Q96M32 723 aa18.2■□□□□ 0.5
SPOCK1-206ENST00000509293 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-206ENST00000509293 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
SPOCK1-206ENST00000509293 ADCY9O60503 1353 aa18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 ERVV-1B6SEH8 477 aa18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SPOCK1-206ENST00000509293 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SPOCK1-206ENST00000509293 GNPATO15228 680 aa18.18■□□□□ 0.5
SPOCK1-206ENST00000509293 SSFA2P28290 1259 aa18.18■□□□□ 0.5
SPOCK1-206ENST00000509293 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
SPOCK1-206ENST00000509293 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
SPOCK1-206ENST00000509293 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms