RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 THBS1P07996 1170 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 DBN1Q16643 649 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 VWA5B2Q8N398 1253 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 ARXQ96QS3 562 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
NFKB1-208ENST00000509165 F11P03951 625 aa8.37□□□□□ -1.07
NFKB1-208ENST00000509165 RFX1P22670 979 aa8.37□□□□□ -1.07
NFKB1-208ENST00000509165 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
NFKB1-208ENST00000509165 TRIM22Q8IYM9 498 aa8.37□□□□□ -1.07
NFKB1-208ENST00000509165 ZNF837Q96EG3 531 aaPredicted RBP8.37□□□□□ -1.07
NFKB1-208ENST00000509165 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
NFKB1-208ENST00000509165 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
NFKB1-208ENST00000509165 NIFKQ9BYG3 293 aaKnown RBP8.37□□□□□ -1.07
NFKB1-208ENST00000509165 PLA2G4AP47712 749 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 DPYDQ12882 1025 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 SV2AQ7L0J3 742 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
NFKB1-208ENST00000509165 ZDHHC1Q8WTX9 485 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
NFKB1-208ENST00000509165 CDC14CA4D256 554 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 MSX1P28360 303 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 SEC13P55735 322 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 MARSP56192 900 aaKnown RBP8.35□□□□□ -1.07
NFKB1-208ENST00000509165 CDCA8Q53HL2 280 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
NFKB1-208ENST00000509165 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 ATP4AP20648 1035 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 UBAP2LQ14157 1087 aaKnown RBP8.34□□□□□ -1.07
NFKB1-208ENST00000509165 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 TBCELQ5QJ74 424 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 RIPOR1Q6ZS17 1223 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
NFKB1-208ENST00000509165 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
NFKB1-208ENST00000509165 TIMELESSQ9UNS1 1208 aa8.34□□□□□ -1.07
NFKB1-208ENST00000509165 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.33□□□□□ -1.08
NFKB1-208ENST00000509165 H7C1W4 665 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 C21orf2O43822 256 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 TEAD4Q15561 434 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 CRISPLD1Q9H336 500 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 GPAMQ9HCL2 828 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
NFKB1-208ENST00000509165 NOS2P35228 1153 aa8.32□□□□□ -1.08
NFKB1-208ENST00000509165 GAS6Q14393 721 aa8.32□□□□□ -1.08
NFKB1-208ENST00000509165 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
NFKB1-208ENST00000509165 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
NFKB1-208ENST00000509165 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
NFKB1-208ENST00000509165 PARP3Q9Y6F1 533 aa8.32□□□□□ -1.08
NFKB1-208ENST00000509165 EML1O00423 815 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 MSTNO14793 375 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 TXLNAP40222 546 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 ELOAQ14241 798 aaKnown RBP8.31□□□□□ -1.08
NFKB1-208ENST00000509165 SH3PXD2AQ5TCZ1 1133 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 L3MBTL2Q969R5 705 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
NFKB1-208ENST00000509165 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 ZMIZ1Q9ULJ6 1067 aa8.31□□□□□ -1.08
NFKB1-208ENST00000509165 ATG7O95352 703 aa8.3□□□□□ -1.08
NFKB1-208ENST00000509165 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
NFKB1-208ENST00000509165 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
NFKB1-208ENST00000509165 GTPBP3Q969Y2 492 aaKnown RBP8.3□□□□□ -1.08
NFKB1-208ENST00000509165 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
NFKB1-208ENST00000509165 GPR25O00155 361 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 HIRAP54198 1017 aaPredicted RBP8.29□□□□□ -1.08
NFKB1-208ENST00000509165 PSMA6P60900 246 aaKnown RBP8.29□□□□□ -1.08
NFKB1-208ENST00000509165 PLA2G4EQ3MJ16 856 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 PBXIP1Q96AQ6 731 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
NFKB1-208ENST00000509165 ATAD2Q6PL18 1390 aa8.29□□□□□ -1.08
NFKB1-208ENST00000509165 FAM69CQ0P6D2 419 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 GAS2L2Q8NHY3 880 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 FAM200AQ8TCP9 573 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
NFKB1-208ENST00000509165 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 LGR5O75473 907 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 SLURP2P0DP57 97 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 CSB-PGBD3P0DP91 1061 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 Q8N3U1 123 aa8.27□□□□□ -1.09
NFKB1-208ENST00000509165 SCG3Q8WXD2 468 aaKnown RBP8.27□□□□□ -1.09
NFKB1-208ENST00000509165 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
NFKB1-208ENST00000509165 NDFIP2Q9NV92 336 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms