RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
RFC1-211ENST00000509084 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
RFC1-211ENST00000509084 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
RFC1-211ENST00000509084 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
RFC1-211ENST00000509084 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
RFC1-211ENST00000509084 C5P01031 1676 aa13.29□□□□□ -0.28
RFC1-211ENST00000509084 MS4A1P11836 297 aa13.29□□□□□ -0.28
RFC1-211ENST00000509084 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
RFC1-211ENST00000509084 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
RFC1-211ENST00000509084 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
RFC1-211ENST00000509084 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
RFC1-211ENST00000509084 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
RFC1-211ENST00000509084 IPO8O15397 1037 aaKnown RBP13.28□□□□□ -0.28
RFC1-211ENST00000509084 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
RFC1-211ENST00000509084 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
RFC1-211ENST00000509084 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
RFC1-211ENST00000509084 BTAF1O14981 1849 aa13.27□□□□□ -0.28
RFC1-211ENST00000509084 BCAR3O75815 825 aa13.27□□□□□ -0.29
RFC1-211ENST00000509084 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
RFC1-211ENST00000509084 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.29
RFC1-211ENST00000509084 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
RFC1-211ENST00000509084 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
RFC1-211ENST00000509084 DBF4Q9UBU7 674 aaPredicted RBP13.27□□□□□ -0.29
RFC1-211ENST00000509084 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
RFC1-211ENST00000509084 PTCD1O75127 700 aaKnown RBP13.26□□□□□ -0.29
RFC1-211ENST00000509084 PTPRCP08575 1304 aa13.26□□□□□ -0.29
RFC1-211ENST00000509084 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
RFC1-211ENST00000509084 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
RFC1-211ENST00000509084 KCNQ2O43526 872 aa13.25□□□□□ -0.29
RFC1-211ENST00000509084 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
RFC1-211ENST00000509084 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
RFC1-211ENST00000509084 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
RFC1-211ENST00000509084 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
RFC1-211ENST00000509084 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
RFC1-211ENST00000509084 STARD3NLO95772 234 aa13.24□□□□□ -0.29
RFC1-211ENST00000509084 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
RFC1-211ENST00000509084 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFC1-211ENST00000509084 TJP1Q07157 1748 aa13.24□□□□□ -0.29
RFC1-211ENST00000509084 LY75O60449 1722 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 SIK1P57059 783 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
RFC1-211ENST00000509084 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
RFC1-211ENST00000509084 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
RFC1-211ENST00000509084 FTSJ3Q8IY81 847 aaKnown RBP13.22□□□□□ -0.29
RFC1-211ENST00000509084 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
RFC1-211ENST00000509084 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
RFC1-211ENST00000509084 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
RFC1-211ENST00000509084 PLIN1O60240 522 aa13.21□□□□□ -0.29
RFC1-211ENST00000509084 FLIIQ13045 1269 aa13.21□□□□□ -0.29
RFC1-211ENST00000509084 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
RFC1-211ENST00000509084 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
RFC1-211ENST00000509084 PXDNLA1KZ92 1463 aa13.21□□□□□ -0.3
RFC1-211ENST00000509084 COL5A3P25940 1745 aaPredicted RBP13.2□□□□□ -0.3
RFC1-211ENST00000509084 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
RFC1-211ENST00000509084 TRIM27P14373 513 aa13.2□□□□□ -0.3
RFC1-211ENST00000509084 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
RFC1-211ENST00000509084 RREB1Q92766 1687 aa13.2□□□□□ -0.3
RFC1-211ENST00000509084 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
RFC1-211ENST00000509084 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
RFC1-211ENST00000509084 ABCC4O15439 1325 aa13.19□□□□□ -0.3
RFC1-211ENST00000509084 TRIM37O94972 964 aa13.19□□□□□ -0.3
RFC1-211ENST00000509084 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
RFC1-211ENST00000509084 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
RFC1-211ENST00000509084 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
RFC1-211ENST00000509084 CYP19A1P11511 503 aaPredicted RBP13.18□□□□□ -0.3
RFC1-211ENST00000509084 PDIA6Q15084 440 aa13.18□□□□□ -0.3
RFC1-211ENST00000509084 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
RFC1-211ENST00000509084 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
RFC1-211ENST00000509084 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 PLSCR1O15162 318 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 AAMPQ13685 434 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 FKBP8Q14318 412 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 G2E3Q7L622 706 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
RFC1-211ENST00000509084 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
RFC1-211ENST00000509084 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
RFC1-211ENST00000509084 MYL6BP14649 208 aa13.16□□□□□ -0.3
RFC1-211ENST00000509084 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
RFC1-211ENST00000509084 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
RFC1-211ENST00000509084 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
RFC1-211ENST00000509084 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
RFC1-211ENST00000509084 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
RFC1-211ENST00000509084 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
RFC1-211ENST00000509084 ANXA1P04083 346 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 A1BGP04217 495 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
RFC1-211ENST00000509084 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
RFC1-211ENST00000509084 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
RFC1-211ENST00000509084 ITPK1Q13572 414 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
RFC1-211ENST00000509084 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
RFC1-211ENST00000509084 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms