RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
POLR2J3-214ENST00000508910 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
POLR2J3-214ENST00000508910 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
POLR2J3-214ENST00000508910 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
POLR2J3-214ENST00000508910 LY75O60449 1722 aa13.92□□□□□ -0.18
POLR2J3-214ENST00000508910 PTPRCP08575 1304 aa13.91□□□□□ -0.18
POLR2J3-214ENST00000508910 PTF1AQ7RTS3 328 aa13.91□□□□□ -0.18
POLR2J3-214ENST00000508910 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
POLR2J3-214ENST00000508910 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
POLR2J3-214ENST00000508910 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 LOC102724428A0A0B4J2F2 783 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 STARD3NLO95772 234 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 MS4A1P11836 297 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 SIK1P57059 783 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 EP400Q96L91 3159 aa13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-214ENST00000508910 RREB1Q92766 1687 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 TRIM37O94972 964 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 TRIM27P14373 513 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 FLIIQ13045 1269 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
POLR2J3-214ENST00000508910 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
POLR2J3-214ENST00000508910 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-214ENST00000508910 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-214ENST00000508910 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
POLR2J3-214ENST00000508910 N4BP2Q86UW6 1770 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 PDIA6Q15084 440 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 G2E3Q7L622 706 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 ABCC4O15439 1325 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
POLR2J3-214ENST00000508910 ANXA1P04083 346 aa13.86□□□□□ -0.19
POLR2J3-214ENST00000508910 FKBP5Q13451 457 aaPredicted RBP13.86□□□□□ -0.19
POLR2J3-214ENST00000508910 FKBP8Q14318 412 aa13.86□□□□□ -0.19
POLR2J3-214ENST00000508910 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 A1BGP04217 495 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 RLBP1P12271 317 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 MYL6BP14649 208 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 ITPK1Q13572 414 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 PHAXQ9H814 394 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
POLR2J3-214ENST00000508910 DDX58O95786 925 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-214ENST00000508910 ERICH6BQ5W0A0 696 aa13.84□□□□□ -0.19
POLR2J3-214ENST00000508910 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
POLR2J3-214ENST00000508910 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
POLR2J3-214ENST00000508910 HMGB2P26583 209 aaKnown RBP13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 CRKLP46109 303 aaKnown RBP13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 ADCY9O60503 1353 aa13.83□□□□□ -0.2
POLR2J3-214ENST00000508910 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
POLR2J3-214ENST00000508910 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 PLSCR1O15162 318 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 APBA3O96018 575 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 ITPRIPQ8IWB1 547 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
POLR2J3-214ENST00000508910 PI4KAP2A4QPH2 592 aa13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 F6X3S4 739 aa13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 INTS3Q68E01 1043 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 PI4KAP1Q8N8J0 262 aa13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
POLR2J3-214ENST00000508910 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms