RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NLRP7Q8WX94 980 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 GOLIM4O00461 696 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 GIMAP6Q6P9H5 292 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 FNBP4Q8N3X1 1017 aaPredicted RBP4.78□□□□□ -1.64
NEDD4-209ENST00000508871 PPP1R12CQ9BZL4 782 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 EIF3AQ14152 1382 aaKnown RBP4.78□□□□□ -1.64
NEDD4-209ENST00000508871 NEUROD1Q13562 356 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 RNF34Q969K3 372 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 NDUFB9Q9Y6M9 179 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 DLC1Q96QB1 1528 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 UBR1Q8IWV7 1749 aa4.78□□□□□ -1.64
NEDD4-209ENST00000508871 PLEKHG3A1L390 1219 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 PALM3A6NDB9 673 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 FOXD4Q12950 439 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 CCDC144BQ3MJ40 725 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 SDE2Q6IQ49 451 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 COL4A3BPQ9Y5P4 624 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 TRIM29Q14134 588 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 ERICH6BQ5W0A0 696 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 ERVK-7P63135 1459 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 SCAF11Q99590 1463 aaKnown RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 TMTC2Q8N394 836 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 EFCAB3Q8N7B9 438 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 SPC25Q9HBM1 224 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 SFMBT1Q9UHJ3 866 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 NAP1L2Q9ULW6 460 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 ATP2B4P23634 1241 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 PROM2Q8N271 834 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 CCDC85AQ96PX6 553 aaPredicted RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 NOP58Q9Y2X3 529 aaKnown RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 SLC4A7Q9Y6M7 1214 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 KAT6BQ8WYB5 2073 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF280DQ6N043 979 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 NOP9Q86U38 636 aaKnown RBP4.77□□□□□ -1.65
NEDD4-209ENST00000508871 L3MBTL2Q969R5 705 aa4.77□□□□□ -1.65
NEDD4-209ENST00000508871 INSRP06213 1382 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 NFE2L2Q16236 605 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 PIK3C2GO75747 1445 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 NPATQ14207 1427 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 CCDC7Q96M83 1385 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 NDUFB5O43674 189 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 C3P01024 1663 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF76P36508 570 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF662Q6ZS27 426 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 SPDYE1Q8NFV5 336 aaPredicted RBP4.76□□□□□ -1.65
NEDD4-209ENST00000508871 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 USP47Q96K76 1375 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 DDX11L8A8MPP1 907 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 LGR5O75473 907 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 ATP6V1E1P36543 226 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 SLFNL1Q499Z3 407 aa4.76□□□□□ -1.65
NEDD4-209ENST00000508871 CC2D1BQ5T0F9 858 aaKnown RBP4.76□□□□□ -1.65
NEDD4-209ENST00000508871 SCAMP3O14828 347 aaKnown RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 AGERQ15109 404 aa4.75□□□□□ -1.65
NEDD4-209ENST00000508871 NOVA2Q9UNW9 492 aaKnown RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 SRRTQ9BXP5 876 aaKnown RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 UNCXA6NJT0 531 aa4.75□□□□□ -1.65
NEDD4-209ENST00000508871 FMNL1O95466 1100 aaPredicted RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 HDGFP51858 240 aaKnown RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF622Q969S3 477 aaKnown RBP eCLIP4.75□□□□□ -1.653e-6■■■□□ 16.2
NEDD4-209ENST00000508871 ADGRB1O14514 1584 aa4.75□□□□□ -1.65
NEDD4-209ENST00000508871 EVLQ9UI08 416 aaPredicted RBP4.75□□□□□ -1.65
NEDD4-209ENST00000508871 SBNO2Q9Y2G9 1366 aa4.75□□□□□ -1.65
NEDD4-209ENST00000508871 KIF20BQ96Q89 1820 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 HSPA5P11021 654 aaKnown RBP4.74□□□□□ -1.65
NEDD4-209ENST00000508871 CCT6BQ92526 530 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 PAGR1Q9BTK6 254 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 ADGRB2O60241 1585 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 C6orf229H3BNL8 230 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 SORBS3O60504 671 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 MFSD4BQ5TF39 518 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 TRIM11Q96F44 468 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 TRIM37O94972 964 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 BIRC3Q13489 604 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 SIX5Q8N196 739 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 ATRIPQ8WXE1 791 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 FBXO9Q9UK97 447 aaPredicted RBP4.74□□□□□ -1.65
NEDD4-209ENST00000508871 YEATS2Q9ULM3 1422 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 NLRP1Q9C000 1473 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 PRMT3O60678 531 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 RBM10P98175 930 aaKnown RBP4.74□□□□□ -1.65
NEDD4-209ENST00000508871 PDE1CQ14123 709 aaPredicted RBP4.74□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF710Q8N1W2 664 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 PPM1EQ8WY54 764 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 CDC5LQ99459 802 aaKnown RBP4.74□□□□□ -1.65
NEDD4-209ENST00000508871 MAP10Q9P2G4 905 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 CPS1P31327 1500 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 NRXN3Q9Y4C0 1643 aa4.74□□□□□ -1.65
NEDD4-209ENST00000508871 TSHZ1Q6ZSZ6 1077 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 AFAP1Q8N556 730 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 PPP1R14AQ96A00 147 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 ADAMTSL3P82987 1691 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 RBM47A0AV96 593 aaKnown RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 PES1O00541 588 aaKnown RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 ZNF500O60304 480 aaPredicted RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 RRP12Q5JTH9 1297 aaKnown RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 CCDC89Q8N998 374 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 GGT7Q9UJ14 662 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1542.9 ms