RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 TSPAN10Q9H1Z9 355 aaPredicted RBP10.78□□□□□ -0.68
GYPB-210ENST00000508841 POLMQ9NP87 494 aaPredicted RBP10.78□□□□□ -0.68
GYPB-210ENST00000508841 GNASQ5JWF2 1037 aa10.77□□□□□ -0.69
GYPB-210ENST00000508841 TMEM214Q6NUQ4 689 aaKnown RBP10.77□□□□□ -0.69
GYPB-210ENST00000508841 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
GYPB-210ENST00000508841 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
GYPB-210ENST00000508841 INSM2Q96T92 566 aaPredicted RBP10.77□□□□□ -0.69
GYPB-210ENST00000508841 SLAIN2Q9P270 581 aa10.77□□□□□ -0.69
GYPB-210ENST00000508841 GNEQ9Y223 722 aaKnown RBP10.77□□□□□ -0.69
GYPB-210ENST00000508841 PPP1R12BO60237 982 aaPredicted RBP10.76□□□□□ -0.69
GYPB-210ENST00000508841 TAS1R3Q7RTX0 852 aa10.76□□□□□ -0.69
GYPB-210ENST00000508841 GRIP2Q9C0E4 1043 aa10.76□□□□□ -0.69
GYPB-210ENST00000508841 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
GYPB-210ENST00000508841 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
GYPB-210ENST00000508841 PHLDB3Q6NSJ2 640 aa10.75□□□□□ -0.69
GYPB-210ENST00000508841 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
GYPB-210ENST00000508841 TEAD4Q15561 434 aa10.74□□□□□ -0.69
GYPB-210ENST00000508841 NPAS3Q8IXF0 933 aa10.74□□□□□ -0.69
GYPB-210ENST00000508841 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
GYPB-210ENST00000508841 C21orf2O43822 256 aa10.73□□□□□ -0.69
GYPB-210ENST00000508841 HIRAP54198 1017 aaPredicted RBP10.73□□□□□ -0.69
GYPB-210ENST00000508841 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
GYPB-210ENST00000508841 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
GYPB-210ENST00000508841 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
GYPB-210ENST00000508841 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
GYPB-210ENST00000508841 SERTM1A2A2V5 107 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 TTLL8A6PVC2 850 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 CTSOP43234 321 aaPredicted RBP10.72□□□□□ -0.69
GYPB-210ENST00000508841 VEGFBP49765 207 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
GYPB-210ENST00000508841 POTEAQ6S8J7 498 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 TRIM46Q7Z4K8 759 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 C2orf49Q9BVC5 232 aaPredicted RBP10.72□□□□□ -0.69
GYPB-210ENST00000508841 CABP1Q9NZU7 370 aa10.72□□□□□ -0.69
GYPB-210ENST00000508841 BMP1P13497 986 aa10.71□□□□□ -0.69
GYPB-210ENST00000508841 LYSMD3Q7Z3D4 306 aa10.71□□□□□ -0.69
GYPB-210ENST00000508841 RNF217Q8TC41 542 aa10.71□□□□□ -0.69
GYPB-210ENST00000508841 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.69
GYPB-210ENST00000508841 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
GYPB-210ENST00000508841 LGR5O75473 907 aa10.7□□□□□ -0.7
GYPB-210ENST00000508841 NOS2P35228 1153 aa10.7□□□□□ -0.7
GYPB-210ENST00000508841 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
GYPB-210ENST00000508841 IVNS1ABPQ9Y6Y0 642 aa10.7□□□□□ -0.7
GYPB-210ENST00000508841 H3BM21 787 aa10.69□□□□□ -0.7
GYPB-210ENST00000508841 ZFP42Q96MM3 310 aa10.69□□□□□ -0.7
GYPB-210ENST00000508841 EGFL7Q9UHF1 273 aa10.69□□□□□ -0.7
GYPB-210ENST00000508841 ZNF232Q9UNY5 417 aa10.69□□□□□ -0.7
GYPB-210ENST00000508841 EML1O00423 815 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 SUZ12Q15022 739 aaKnown RBP10.68□□□□□ -0.7
GYPB-210ENST00000508841 NBPF1Q3BBV0 1214 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 TBCELQ5QJ74 424 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 ZNF295-AS1Q8N0V1 137 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 L3MBTL2Q969R5 705 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 USP3Q9Y6I4 520 aa10.68□□□□□ -0.7
GYPB-210ENST00000508841 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
GYPB-210ENST00000508841 MKNK1Q9BUB5 465 aa10.67□□□□□ -0.7
GYPB-210ENST00000508841 ZDHHC3Q9NYG2 299 aa10.67□□□□□ -0.7
GYPB-210ENST00000508841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.66□□□□□ -0.7
GYPB-210ENST00000508841 C4orf17Q53FE4 359 aa10.66□□□□□ -0.7
GYPB-210ENST00000508841 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
GYPB-210ENST00000508841 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
GYPB-210ENST00000508841 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
GYPB-210ENST00000508841 PLA2G4AP47712 749 aa10.65□□□□□ -0.7
GYPB-210ENST00000508841 HIF1AQ16665 826 aa10.65□□□□□ -0.7
GYPB-210ENST00000508841 PRICKLE2Q7Z3G6 844 aa10.65□□□□□ -0.7
GYPB-210ENST00000508841 ZDHHC1Q8WTX9 485 aa10.65□□□□□ -0.7
GYPB-210ENST00000508841 MYO19Q96H55 970 aa10.65□□□□□ -0.7
GYPB-210ENST00000508841 TATP17735 454 aaPredicted RBP10.64□□□□□ -0.71
GYPB-210ENST00000508841 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
GYPB-210ENST00000508841 C16orf46Q6P387 395 aa10.64□□□□□ -0.71
GYPB-210ENST00000508841 A0A1B0GTH6 734 aa10.63□□□□□ -0.71
GYPB-210ENST00000508841 MAN1A2O60476 641 aa10.63□□□□□ -0.71
GYPB-210ENST00000508841 POU4F2Q12837 409 aa10.63□□□□□ -0.71
GYPB-210ENST00000508841 RTN1Q16799 776 aa10.63□□□□□ -0.71
GYPB-210ENST00000508841 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
GYPB-210ENST00000508841 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
GYPB-210ENST00000508841 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
GYPB-210ENST00000508841 TIMMDC1Q9NPL8 285 aa10.62□□□□□ -0.71
GYPB-210ENST00000508841 PHACTR1Q9C0D0 580 aa10.61□□□□□ -0.71
GYPB-210ENST00000508841 GZF1Q9H116 711 aaPredicted RBP10.61□□□□□ -0.71
GYPB-210ENST00000508841 SEPT3Q9UH03 358 aa10.61□□□□□ -0.71
GYPB-210ENST00000508841 DNMT3LQ9UJW3 386 aa10.61□□□□□ -0.71
GYPB-210ENST00000508841 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
GYPB-210ENST00000508841 ABL1P00519 1130 aa10.6□□□□□ -0.71
GYPB-210ENST00000508841 SERPINB4P48594 390 aa10.6□□□□□ -0.71
GYPB-210ENST00000508841 SND1Q7KZF4 910 aaKnown RBP eCLIP10.6□□□□□ -0.71
GYPB-210ENST00000508841 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
GYPB-210ENST00000508841 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
GYPB-210ENST00000508841 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
GYPB-210ENST00000508841 PHKA2P46019 1235 aa10.59□□□□□ -0.71
GYPB-210ENST00000508841 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
GYPB-210ENST00000508841 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
GYPB-210ENST00000508841 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
GYPB-210ENST00000508841 QTRT2Q9H974 415 aaKnown RBP10.59□□□□□ -0.71
GYPB-210ENST00000508841 HCN4Q9Y3Q4 1203 aa10.59□□□□□ -0.71
GYPB-210ENST00000508841 DYRK1BQ9Y463 629 aa10.59□□□□□ -0.71
GYPB-210ENST00000508841 ICMTO60725 284 aa10.58□□□□□ -0.72
GYPB-210ENST00000508841 SCNN1AP37088 669 aa10.58□□□□□ -0.72
GYPB-210ENST00000508841 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
GYPB-210ENST00000508841 ABTB2Q8N961 1025 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms