RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 CREBZFQ9NS37 354 aa18.27■□□□□ 0.52
SGCA-206ENST00000508382 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
SGCA-206ENST00000508382 POTEIP0CG38 1075 aa18.26■□□□□ 0.51
SGCA-206ENST00000508382 POTEJP0CG39 1038 aa18.26■□□□□ 0.51
SGCA-206ENST00000508382 LMNB1P20700 586 aa18.26■□□□□ 0.51
SGCA-206ENST00000508382 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
SGCA-206ENST00000508382 EMILIN1Q9Y6C2 1016 aa18.26■□□□□ 0.51
SGCA-206ENST00000508382 CNTNAP1P78357 1384 aa18.26■□□□□ 0.51
SGCA-206ENST00000508382 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
SGCA-206ENST00000508382 RALBP1Q15311 655 aa18.25■□□□□ 0.51
SGCA-206ENST00000508382 KIF24Q5T7B8 1368 aa18.25■□□□□ 0.51
SGCA-206ENST00000508382 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
SGCA-206ENST00000508382 NFKBIEO00221 500 aa18.24■□□□□ 0.51
SGCA-206ENST00000508382 ABHD8Q96I13 439 aa18.24■□□□□ 0.51
SGCA-206ENST00000508382 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
SGCA-206ENST00000508382 TM4SF1P30408 202 aa18.23■□□□□ 0.51
SGCA-206ENST00000508382 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
SGCA-206ENST00000508382 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
SGCA-206ENST00000508382 LBX1P52954 281 aa18.22■□□□□ 0.51
SGCA-206ENST00000508382 EYA1Q99502 592 aa18.22■□□□□ 0.51
SGCA-206ENST00000508382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.51
SGCA-206ENST00000508382 ANKRD31Q8N7Z5 1873 aa18.2■□□□□ 0.5
SGCA-206ENST00000508382 VEGFBP49765 207 aa18.2■□□□□ 0.5
SGCA-206ENST00000508382 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
SGCA-206ENST00000508382 PASKQ96RG2 1323 aa18.2■□□□□ 0.5
SGCA-206ENST00000508382 TNRC18O15417 2968 aaPredicted RBP18.19■□□□□ 0.5
SGCA-206ENST00000508382 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
SGCA-206ENST00000508382 WBP1LQ9NX94 342 aa18.19■□□□□ 0.5
SGCA-206ENST00000508382 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
SGCA-206ENST00000508382 COL11A2P13942 1736 aaPredicted RBP18.18■□□□□ 0.5
SGCA-206ENST00000508382 CACNA1SQ13698 1873 aa18.17■□□□□ 0.5
SGCA-206ENST00000508382 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
SGCA-206ENST00000508382 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
SGCA-206ENST00000508382 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
SGCA-206ENST00000508382 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
SGCA-206ENST00000508382 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
SGCA-206ENST00000508382 RGS19P49795 217 aa18.15■□□□□ 0.5
SGCA-206ENST00000508382 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
SGCA-206ENST00000508382 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
SGCA-206ENST00000508382 AIDAQ96BJ3 306 aa18.15■□□□□ 0.5
SGCA-206ENST00000508382 SCN4AP35499 1836 aa18.14■□□□□ 0.5
SGCA-206ENST00000508382 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
SGCA-206ENST00000508382 MLLT1Q03111 559 aaPredicted RBP18.14■□□□□ 0.49
SGCA-206ENST00000508382 TTLL6Q8N841 843 aa18.14■□□□□ 0.49
SGCA-206ENST00000508382 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.49
SGCA-206ENST00000508382 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
SGCA-206ENST00000508382 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
SGCA-206ENST00000508382 NFIXQ14938 502 aa18.13■□□□□ 0.49
SGCA-206ENST00000508382 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
SGCA-206ENST00000508382 PANK3Q9H999 370 aa18.13■□□□□ 0.49
SGCA-206ENST00000508382 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
SGCA-206ENST00000508382 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
SGCA-206ENST00000508382 ITGBL1O95965 494 aaPredicted RBP18.11■□□□□ 0.49
SGCA-206ENST00000508382 ERFEQ4G0M1 354 aa18.11■□□□□ 0.49
SGCA-206ENST00000508382 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SGCA-206ENST00000508382 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
SGCA-206ENST00000508382 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
SGCA-206ENST00000508382 SLX4Q8IY92 1834 aa18.1■□□□□ 0.49
SGCA-206ENST00000508382 SCN11AQ9UI33 1791 aa18.1■□□□□ 0.49
SGCA-206ENST00000508382 THSD7BQ9C0I4 1608 aa18.1■□□□□ 0.49
SGCA-206ENST00000508382 CCDC85CA6NKD9 419 aa18.1■□□□□ 0.49
SGCA-206ENST00000508382 SOS1Q07889 1333 aaPredicted RBP18.09■□□□□ 0.49
SGCA-206ENST00000508382 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
SGCA-206ENST00000508382 SERPINB2P05120 415 aa18.08■□□□□ 0.48
SGCA-206ENST00000508382 CABP4P57796 275 aa18.08■□□□□ 0.48
SGCA-206ENST00000508382 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
SGCA-206ENST00000508382 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
SGCA-206ENST00000508382 C21orf2O43822 256 aa18.07■□□□□ 0.48
SGCA-206ENST00000508382 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
SGCA-206ENST00000508382 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
SGCA-206ENST00000508382 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 ZPR1O75312 459 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 LDHDQ86WU2 507 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 NFATC2IPQ8NCF5 419 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
SGCA-206ENST00000508382 TAF1DQ9H5J8 278 aaPredicted RBP18.05■□□□□ 0.48
SGCA-206ENST00000508382 NARFQ9UHQ1 456 aa18.05■□□□□ 0.48
SGCA-206ENST00000508382 H0YIN7 160 aa18.04■□□□□ 0.48
SGCA-206ENST00000508382 COL15A1P39059 1388 aa18.04■□□□□ 0.48
SGCA-206ENST00000508382 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
SGCA-206ENST00000508382 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
SGCA-206ENST00000508382 CASP8AP2Q9UKL3 1982 aa18.03■□□□□ 0.48
SGCA-206ENST00000508382 HSP90AB1P08238 724 aaKnown RBP18.03■□□□□ 0.48
SGCA-206ENST00000508382 ZNF530Q6P9A1 599 aaPredicted RBP18.03■□□□□ 0.48
SGCA-206ENST00000508382 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
SGCA-206ENST00000508382 DEFB115Q30KQ5 88 aa18.02■□□□□ 0.48
SGCA-206ENST00000508382 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
SGCA-206ENST00000508382 L3MBTL3Q96JM7 780 aaPredicted RBP18.02■□□□□ 0.48
SGCA-206ENST00000508382 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
SGCA-206ENST00000508382 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
SGCA-206ENST00000508382 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.47
SGCA-206ENST00000508382 TAOK3Q9H2K8 898 aa18.01■□□□□ 0.47
SGCA-206ENST00000508382 ZBTB1Q9Y2K1 713 aa18.01■□□□□ 0.47
SGCA-206ENST00000508382 MTHFSP49914 203 aa18■□□□□ 0.47
SGCA-206ENST00000508382 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
SGCA-206ENST00000508382 SCN7AQ01118 1682 aa17.99■□□□□ 0.47
SGCA-206ENST00000508382 MAP2K1Q02750 393 aaPredicted RBP17.99■□□□□ 0.47
SGCA-206ENST00000508382 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
SGCA-206ENST00000508382 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms