RNA–Protein interactions for RNA: ENST00000507967.1

NEK11-206, Transcript of NIMA related kinase 11, humanhuman

TSL 4

Gene NEK11, Length 591 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-206ENST00000507967 KIF3CO14782 793 aa16.62■□□□□ 0.25
NEK11-206ENST00000507967 TEFQ10587 303 aa16.62■□□□□ 0.25
NEK11-206ENST00000507967 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
NEK11-206ENST00000507967 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
NEK11-206ENST00000507967 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
NEK11-206ENST00000507967 HTATSF1O43719 755 aaKnown RBP16.61■□□□□ 0.25
NEK11-206ENST00000507967 MCM10Q7L590 875 aa16.61■□□□□ 0.25
NEK11-206ENST00000507967 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
NEK11-206ENST00000507967 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
NEK11-206ENST00000507967 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
NEK11-206ENST00000507967 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
NEK11-206ENST00000507967 NEFMP07197 916 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 RFC4P35249 363 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 APLP1P51693 650 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
NEK11-206ENST00000507967 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
NEK11-206ENST00000507967 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
NEK11-206ENST00000507967 RPS6KA4O75676 772 aa16.58■□□□□ 0.24
NEK11-206ENST00000507967 DPEP1P16444 411 aa16.58■□□□□ 0.24
NEK11-206ENST00000507967 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
NEK11-206ENST00000507967 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
NEK11-206ENST00000507967 NMRK2Q9NPI5 230 aa16.58■□□□□ 0.24
NEK11-206ENST00000507967 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 KCNQ3O43525 872 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
NEK11-206ENST00000507967 TGFB2P61812 414 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
NEK11-206ENST00000507967 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 NLGN1Q8N2Q7 840 aa16.57■□□□□ 0.24
NEK11-206ENST00000507967 ARHGEF1Q92888 912 aaKnown RBP16.57■□□□□ 0.24
NEK11-206ENST00000507967 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
NEK11-206ENST00000507967 TOMM70O94826 608 aa16.56■□□□□ 0.24
NEK11-206ENST00000507967 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
NEK11-206ENST00000507967 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 KIF13BQ9NQT8 1826 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 KIAA1551Q9HCM1 1747 aa16.55■□□□□ 0.24
NEK11-206ENST00000507967 WDR43Q15061 677 aaKnown RBP eCLIP16.54■□□□□ 0.24
NEK11-206ENST00000507967 GYS1P13807 737 aa16.53■□□□□ 0.24
NEK11-206ENST00000507967 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
NEK11-206ENST00000507967 HTRA3P83110 453 aa16.53■□□□□ 0.24
NEK11-206ENST00000507967 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
NEK11-206ENST00000507967 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
NEK11-206ENST00000507967 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
NEK11-206ENST00000507967 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
NEK11-206ENST00000507967 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
NEK11-206ENST00000507967 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
NEK11-206ENST00000507967 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
NEK11-206ENST00000507967 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
NEK11-206ENST00000507967 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
NEK11-206ENST00000507967 ZBTB1Q9Y2K1 713 aa16.52■□□□□ 0.24
NEK11-206ENST00000507967 RIPK4P57078 832 aa16.51■□□□□ 0.23
NEK11-206ENST00000507967 TEX13AQ9BXU3 409 aaPredicted RBP16.51■□□□□ 0.23
NEK11-206ENST00000507967 RNF181Q9P0P0 153 aa16.51■□□□□ 0.23
NEK11-206ENST00000507967 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
NEK11-206ENST00000507967 STARD3NLO95772 234 aa16.5■□□□□ 0.23
NEK11-206ENST00000507967 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
NEK11-206ENST00000507967 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
NEK11-206ENST00000507967 WDR90Q96KV7 1748 aa16.5■□□□□ 0.23
NEK11-206ENST00000507967 USP42Q9H9J4 1324 aaKnown RBP16.49■□□□□ 0.23
NEK11-206ENST00000507967 CAPN15O75808 1086 aa16.49■□□□□ 0.23
NEK11-206ENST00000507967 CHRNA5P30532 468 aa16.49■□□□□ 0.23
NEK11-206ENST00000507967 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
NEK11-206ENST00000507967 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
NEK11-206ENST00000507967 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
NEK11-206ENST00000507967 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 ANP32CO43423 234 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 FKBP8Q14318 412 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 COL15A1P39059 1388 aa16.48■□□□□ 0.23
NEK11-206ENST00000507967 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
NEK11-206ENST00000507967 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
NEK11-206ENST00000507967 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
NEK11-206ENST00000507967 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
NEK11-206ENST00000507967 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
NEK11-206ENST00000507967 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
NEK11-206ENST00000507967 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
NEK11-206ENST00000507967 DDR1Q08345 913 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 ARFGEF1Q9Y6D6 1849 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
NEK11-206ENST00000507967 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
NEK11-206ENST00000507967 ZPR1O75312 459 aa16.45■□□□□ 0.22
NEK11-206ENST00000507967 A1BGP04217 495 aa16.45■□□□□ 0.22
NEK11-206ENST00000507967 KCNA3P22001 575 aa16.45■□□□□ 0.22
NEK11-206ENST00000507967 USPL1Q5W0Q7 1092 aa16.45■□□□□ 0.22
NEK11-206ENST00000507967 NARFQ9UHQ1 456 aa16.45■□□□□ 0.22
NEK11-206ENST00000507967 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
NEK11-206ENST00000507967 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
NEK11-206ENST00000507967 NRXN2Q9P2S2 1712 aa16.43■□□□□ 0.22
NEK11-206ENST00000507967 RASSF7Q02833 373 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms