RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
RNF4-208ENST00000507247 PLSCR1O15162 318 aa18.24■□□□□ 0.51
RNF4-208ENST00000507247 BCAR3O75815 825 aa18.24■□□□□ 0.51
RNF4-208ENST00000507247 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
RNF4-208ENST00000507247 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
RNF4-208ENST00000507247 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
RNF4-208ENST00000507247 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
RNF4-208ENST00000507247 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
RNF4-208ENST00000507247 PROM2Q8N271 834 aa18.23■□□□□ 0.51
RNF4-208ENST00000507247 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
RNF4-208ENST00000507247 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
RNF4-208ENST00000507247 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
RNF4-208ENST00000507247 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
RNF4-208ENST00000507247 ANXA1P04083 346 aa18.22■□□□□ 0.51
RNF4-208ENST00000507247 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
RNF4-208ENST00000507247 PDIA6Q15084 440 aa18.22■□□□□ 0.51
RNF4-208ENST00000507247 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
RNF4-208ENST00000507247 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
RNF4-208ENST00000507247 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
RNF4-208ENST00000507247 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
RNF4-208ENST00000507247 A1BGP04217 495 aa18.21■□□□□ 0.51
RNF4-208ENST00000507247 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
RNF4-208ENST00000507247 NBPF26B4DH59 902 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 STARD3NLO95772 234 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 EN1Q05925 392 aaPredicted RBP18.2■□□□□ 0.5
RNF4-208ENST00000507247 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 NBPF10Q6P3W6 841 aaKnown RBP18.2■□□□□ 0.5
RNF4-208ENST00000507247 NBPF15Q8N660 670 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
RNF4-208ENST00000507247 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
RNF4-208ENST00000507247 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
RNF4-208ENST00000507247 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 G2E3Q7L622 706 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 LRP10Q7Z4F1 713 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 CAMKK2Q96RR4 588 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
RNF4-208ENST00000507247 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
RNF4-208ENST00000507247 ZBTB1Q9Y2K1 713 aa18.19■□□□□ 0.5
RNF4-208ENST00000507247 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
RNF4-208ENST00000507247 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
RNF4-208ENST00000507247 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
RNF4-208ENST00000507247 CNTNAP4Q9C0A0 1308 aa18.18■□□□□ 0.5
RNF4-208ENST00000507247 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
RNF4-208ENST00000507247 TUBGCP6Q96RT7 1819 aa18.17■□□□□ 0.5
RNF4-208ENST00000507247 MYL6BP14649 208 aa18.17■□□□□ 0.5
RNF4-208ENST00000507247 BAG6P46379 1132 aa18.17■□□□□ 0.5
RNF4-208ENST00000507247 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
RNF4-208ENST00000507247 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
RNF4-208ENST00000507247 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
RNF4-208ENST00000507247 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
RNF4-208ENST00000507247 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
RNF4-208ENST00000507247 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
RNF4-208ENST00000507247 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
RNF4-208ENST00000507247 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
RNF4-208ENST00000507247 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
RNF4-208ENST00000507247 PLIN1O60240 522 aa18.14■□□□□ 0.49
RNF4-208ENST00000507247 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
RNF4-208ENST00000507247 FLIIQ13045 1269 aa18.14■□□□□ 0.49
RNF4-208ENST00000507247 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.49
RNF4-208ENST00000507247 FRAT1Q92837 279 aaPredicted RBP18.14■□□□□ 0.49
RNF4-208ENST00000507247 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.49
RNF4-208ENST00000507247 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
RNF4-208ENST00000507247 ARFGEF2Q9Y6D5 1785 aa18.13■□□□□ 0.49
RNF4-208ENST00000507247 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
RNF4-208ENST00000507247 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
RNF4-208ENST00000507247 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
RNF4-208ENST00000507247 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
RNF4-208ENST00000507247 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
RNF4-208ENST00000507247 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
RNF4-208ENST00000507247 GNPATO15228 680 aa18.11■□□□□ 0.49
RNF4-208ENST00000507247 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
RNF4-208ENST00000507247 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
RNF4-208ENST00000507247 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
RNF4-208ENST00000507247 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
RNF4-208ENST00000507247 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
RNF4-208ENST00000507247 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
RNF4-208ENST00000507247 COL15A1P39059 1388 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 PTPRCP08575 1304 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 TRIM27P14373 513 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 ZKSCAN2Q63HK3 967 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 TTLL7Q6ZT98 887 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 AK7Q96M32 723 aa18.1■□□□□ 0.49
RNF4-208ENST00000507247 ADCY9O60503 1353 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
RNF4-208ENST00000507247 ATF7IPQ6VMQ6 1270 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 NUP98P52948 1817 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
RNF4-208ENST00000507247 F6X3S4 739 aa18.08■□□□□ 0.48
RNF4-208ENST00000507247 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
RNF4-208ENST00000507247 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.48
RNF4-208ENST00000507247 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
RNF4-208ENST00000507247 C20orf194Q5TEA3 1177 aa18.07■□□□□ 0.48
RNF4-208ENST00000507247 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms