RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 POLRMTO00411 1230 aaKnown RBP10.26□□□□□ -0.77
VCAN-207ENST00000507162 SOX10P56693 466 aa10.26□□□□□ -0.77
VCAN-207ENST00000507162 C2CD5Q86YS7 1000 aa10.26□□□□□ -0.77
VCAN-207ENST00000507162 TAF1DQ9H5J8 278 aaPredicted RBP10.26□□□□□ -0.77
VCAN-207ENST00000507162 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
VCAN-207ENST00000507162 FAM208AQ9UK61 1670 aaKnown RBP10.25□□□□□ -0.77
VCAN-207ENST00000507162 H0YIN7 160 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 C21orf2O43822 256 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
VCAN-207ENST00000507162 TM4SF1P30408 202 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 HSP90AB2PQ58FF8 381 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
VCAN-207ENST00000507162 CYP4F22Q6NT55 531 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 CNTROBQ8N137 903 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 ZNF622Q969S3 477 aaKnown RBP eCLIP10.25□□□□□ -0.77
VCAN-207ENST00000507162 CAPNS2Q96L46 248 aa10.25□□□□□ -0.77
VCAN-207ENST00000507162 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
VCAN-207ENST00000507162 ITGB4P16144 1822 aa10.24□□□□□ -0.77
VCAN-207ENST00000507162 ZPR1O75312 459 aa10.24□□□□□ -0.77
VCAN-207ENST00000507162 ECE1P42892 770 aa10.24□□□□□ -0.77
VCAN-207ENST00000507162 CNTNAP4Q9C0A0 1308 aa10.24□□□□□ -0.77
VCAN-207ENST00000507162 SMG6Q86US8 1419 aaKnown RBP10.24□□□□□ -0.77
VCAN-207ENST00000507162 CCDC88AQ3V6T2 1871 aa10.23□□□□□ -0.77
VCAN-207ENST00000507162 CRKLP46109 303 aaKnown RBP10.23□□□□□ -0.77
VCAN-207ENST00000507162 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
VCAN-207ENST00000507162 USP42Q9H9J4 1324 aaKnown RBP10.23□□□□□ -0.77
VCAN-207ENST00000507162 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
VCAN-207ENST00000507162 VIRMAQ69YN4 1812 aaKnown RBP10.22□□□□□ -0.77
VCAN-207ENST00000507162 AOC2O75106 756 aa10.22□□□□□ -0.77
VCAN-207ENST00000507162 PTCD1O75127 700 aaKnown RBP10.22□□□□□ -0.77
VCAN-207ENST00000507162 IFNL2Q8IZJ0 200 aa10.22□□□□□ -0.77
VCAN-207ENST00000507162 CASP8AP2Q9UKL3 1982 aa10.22□□□□□ -0.77
VCAN-207ENST00000507162 SERPINB2P05120 415 aa10.21□□□□□ -0.77
VCAN-207ENST00000507162 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.77
VCAN-207ENST00000507162 HACL1Q9UJ83 578 aa10.21□□□□□ -0.77
VCAN-207ENST00000507162 A0A1W2PP64 1363 aa10.21□□□□□ -0.78
VCAN-207ENST00000507162 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.78
VCAN-207ENST00000507162 PHKG2P15735 406 aa10.2□□□□□ -0.78
VCAN-207ENST00000507162 EPHX2P34913 555 aa10.2□□□□□ -0.78
VCAN-207ENST00000507162 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.78
VCAN-207ENST00000507162 NFIXQ14938 502 aa10.2□□□□□ -0.78
VCAN-207ENST00000507162 DDX21Q9NR30 783 aaKnown RBP eCLIP10.2□□□□□ -0.78
VCAN-207ENST00000507162 RTL1A6NKG5 1358 aa10.19□□□□□ -0.78
VCAN-207ENST00000507162 ROCK2O75116 1388 aaKnown RBP10.19□□□□□ -0.78
VCAN-207ENST00000507162 PPM1GO15355 546 aaPredicted RBP10.19□□□□□ -0.78
VCAN-207ENST00000507162 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
VCAN-207ENST00000507162 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
VCAN-207ENST00000507162 GGNBP2Q9H3C7 697 aa10.19□□□□□ -0.78
VCAN-207ENST00000507162 KDRP35968 1356 aa10.18□□□□□ -0.78
VCAN-207ENST00000507162 CA12O43570 354 aa10.18□□□□□ -0.78
VCAN-207ENST00000507162 MAP2K2P36507 400 aa10.18□□□□□ -0.78
VCAN-207ENST00000507162 PNMA8AQ86V59 439 aaPredicted RBP10.18□□□□□ -0.78
VCAN-207ENST00000507162 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
VCAN-207ENST00000507162 TIAM2Q8IVF5 1701 aa10.18□□□□□ -0.78
VCAN-207ENST00000507162 INSRP06213 1382 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 ERVV-2B6SEH9 535 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 CABP4P57796 275 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 L3MBTL2Q969R5 705 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 GCC1Q96CN9 775 aa10.17□□□□□ -0.78
VCAN-207ENST00000507162 INTS5Q6P9B9 1019 aaKnown RBP10.16□□□□□ -0.78
VCAN-207ENST00000507162 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
VCAN-207ENST00000507162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
VCAN-207ENST00000507162 MYH14Q7Z406 1995 aaKnown RBP10.15□□□□□ -0.78
VCAN-207ENST00000507162 RNF123Q5XPI4 1314 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 FYB1O15117 783 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 PDE6BP35913 854 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 HABP4Q5JVS0 413 aaKnown RBP10.15□□□□□ -0.78
VCAN-207ENST00000507162 CST9Q5W186 159 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 NBPF15Q8N660 670 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 EYA1Q99502 592 aa10.15□□□□□ -0.78
VCAN-207ENST00000507162 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 TRAF5O00463 557 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 FLT4P35916 1363 aa10.14□□□□□ -0.79
VCAN-207ENST00000507162 NPHP1O15259 732 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 ABCB7O75027 752 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 ZNF277Q9NRM2 450 aaPredicted RBP10.13□□□□□ -0.79
VCAN-207ENST00000507162 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 CARMIL3Q8ND23 1372 aa10.13□□□□□ -0.79
VCAN-207ENST00000507162 DLL1O00548 723 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 HSP90AB1P08238 724 aaKnown RBP10.12□□□□□ -0.79
VCAN-207ENST00000507162 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
VCAN-207ENST00000507162 SOGA3Q5TF21 947 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 PRPF40BQ6NWY9 871 aaKnown RBP10.12□□□□□ -0.79
VCAN-207ENST00000507162 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 NFATC2IPQ8NCF5 419 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 BRIP1Q9BX63 1249 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 GJA3Q9Y6H8 435 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 A0A0C4DFX4 3053 aa10.12□□□□□ -0.79
VCAN-207ENST00000507162 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
VCAN-207ENST00000507162 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
VCAN-207ENST00000507162 MTHFSP49914 203 aa10.11□□□□□ -0.79
VCAN-207ENST00000507162 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms