RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 AK2P54819 239 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 TRPM2O94759 1503 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 ATP2B1P20020 1258 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 GORABQ5T7V8 394 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 ZDHHC9Q9Y397 364 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 TBX22Q9Y458 520 aa11.52□□□□□ -0.57
PHF3-208ENST00000506783 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 ABCC4O15439 1325 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
PHF3-208ENST00000506783 ZKSCAN1P17029 563 aaPredicted RBP11.51□□□□□ -0.57
PHF3-208ENST00000506783 GJB2P29033 226 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
PHF3-208ENST00000506783 ADCK5Q3MIX3 580 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 CNTROBQ8N137 903 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 RTL1A6NKG5 1358 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
PHF3-208ENST00000506783 KRT28Q7Z3Y7 464 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
PHF3-208ENST00000506783 RAB11FIP3O75154 756 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 HSP90AA4PQ58FG1 418 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
PHF3-208ENST00000506783 SYAP1Q96A49 352 aaPredicted RBP11.5□□□□□ -0.57
PHF3-208ENST00000506783 LARGE1O95461 756 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 CBX1P83916 185 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 PRDM11Q9NQV5 511 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 IQGAP3Q86VI3 1631 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 ABCA6Q8N139 1617 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 HAND2P61296 217 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 PTH1RQ03431 593 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 FAM184AQ8NB25 1140 aa11.5□□□□□ -0.57
PHF3-208ENST00000506783 ZHX1Q9UKY1 873 aaPredicted RBP11.5□□□□□ -0.57
PHF3-208ENST00000506783 ADCY5O95622 1261 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHF3-208ENST00000506783 V9GYY5 206 aaPredicted RBP11.49□□□□□ -0.57
PHF3-208ENST00000506783 ABCC3O15438 1527 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 COL9A3Q14050 684 aaPredicted RBP11.49□□□□□ -0.57
PHF3-208ENST00000506783 MYD88Q99836 296 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHF3-208ENST00000506783 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
PHF3-208ENST00000506783 TRIM5Q9C035 493 aa11.49□□□□□ -0.57
PHF3-208ENST00000506783 SEC62Q99442 399 aaKnown RBP11.48□□□□□ -0.57
PHF3-208ENST00000506783 SYT1P21579 422 aa11.48□□□□□ -0.57
PHF3-208ENST00000506783 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
PHF3-208ENST00000506783 NSD2O96028 1365 aa11.48□□□□□ -0.57
PHF3-208ENST00000506783 APPP05067 770 aa11.48□□□□□ -0.57
PHF3-208ENST00000506783 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
PHF3-208ENST00000506783 STX6O43752 255 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 ATP8B2P98198 1209 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 PTPN21Q16825 1174 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 SBNO2Q9Y2G9 1366 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 CWC22Q9HCG8 908 aaKnown RBP11.47□□□□□ -0.57
PHF3-208ENST00000506783 CYP46A1Q9Y6A2 500 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 BIN1O00499 593 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 TRMT1Q9NXH9 659 aaKnown RBP11.47□□□□□ -0.57
PHF3-208ENST00000506783 DIP2BQ9P265 1576 aa11.47□□□□□ -0.57
PHF3-208ENST00000506783 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.57
PHF3-208ENST00000506783 C16orf45Q96MC5 204 aaPredicted RBP11.46□□□□□ -0.57
PHF3-208ENST00000506783 ZBTB3Q9H5J0 574 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 TAF7LQ5H9L4 462 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 TOM1L2Q6ZVM7 507 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 LUZP1Q86V48 1076 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 GPATCH3Q96I76 525 aa11.46□□□□□ -0.57
PHF3-208ENST00000506783 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.572e-7■■□□□ 14.5
PHF3-208ENST00000506783 OTUD7BQ6GQQ9 843 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.58
PHF3-208ENST00000506783 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 MTMR7Q9Y216 660 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 ARAP3Q8WWN8 1544 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 TULP4Q9NRJ4 1543 aa11.46□□□□□ -0.58
PHF3-208ENST00000506783 MAP3K4Q9Y6R4 1608 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 NEXNQ0ZGT2 675 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
PHF3-208ENST00000506783 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 UNC13BO14795 1591 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
PHF3-208ENST00000506783 ROBO2Q9HCK4 1378 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 HOXC9P31274 260 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.58
PHF3-208ENST00000506783 SNX14Q9Y5W7 946 aa11.45□□□□□ -0.58
PHF3-208ENST00000506783 JAK2O60674 1132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms