RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
RETREG1-203ENST00000506441 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
RETREG1-203ENST00000506441 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
RETREG1-203ENST00000506441 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
RETREG1-203ENST00000506441 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
RETREG1-203ENST00000506441 BMP1P13497 986 aa13.08□□□□□ -0.32
RETREG1-203ENST00000506441 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.32
RETREG1-203ENST00000506441 TBCELQ5QJ74 424 aa13.08□□□□□ -0.32
RETREG1-203ENST00000506441 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
RETREG1-203ENST00000506441 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
RETREG1-203ENST00000506441 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
RETREG1-203ENST00000506441 PRICKLE2Q7Z3G6 844 aa13.07□□□□□ -0.32
RETREG1-203ENST00000506441 TRIM46Q7Z4K8 759 aa13.07□□□□□ -0.32
RETREG1-203ENST00000506441 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
RETREG1-203ENST00000506441 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
RETREG1-203ENST00000506441 C21orf2O43822 256 aa13.06□□□□□ -0.32
RETREG1-203ENST00000506441 MAN1A2O60476 641 aa13.06□□□□□ -0.32
RETREG1-203ENST00000506441 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-203ENST00000506441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.06□□□□□ -0.32
RETREG1-203ENST00000506441 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-203ENST00000506441 PHLDB3Q6NSJ2 640 aa13.06□□□□□ -0.32
RETREG1-203ENST00000506441 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
RETREG1-203ENST00000506441 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-203ENST00000506441 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-203ENST00000506441 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
RETREG1-203ENST00000506441 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
RETREG1-203ENST00000506441 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
RETREG1-203ENST00000506441 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
RETREG1-203ENST00000506441 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
RETREG1-203ENST00000506441 POU4F2Q12837 409 aa13.04□□□□□ -0.32
RETREG1-203ENST00000506441 HIF1AQ16665 826 aa13.04□□□□□ -0.32
RETREG1-203ENST00000506441 MKNK1Q9BUB5 465 aa13.04□□□□□ -0.32
RETREG1-203ENST00000506441 FIGNL2A6NMB9 653 aa13.03□□□□□ -0.32
RETREG1-203ENST00000506441 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
RETREG1-203ENST00000506441 C1orf53Q5VUE5 145 aa13.03□□□□□ -0.32
RETREG1-203ENST00000506441 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
RETREG1-203ENST00000506441 Q6ZNB5 142 aa13.03□□□□□ -0.32
RETREG1-203ENST00000506441 ST8SIA5O15466 376 aa13.02□□□□□ -0.33
RETREG1-203ENST00000506441 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
RETREG1-203ENST00000506441 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
RETREG1-203ENST00000506441 TIMMDC1Q9NPL8 285 aa13.02□□□□□ -0.33
RETREG1-203ENST00000506441 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
RETREG1-203ENST00000506441 ABL1P00519 1130 aa13.01□□□□□ -0.33
RETREG1-203ENST00000506441 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
RETREG1-203ENST00000506441 C16orf46Q6P387 395 aa13.01□□□□□ -0.33
RETREG1-203ENST00000506441 ZDHHC3Q9NYG2 299 aa13.01□□□□□ -0.33
RETREG1-203ENST00000506441 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
RETREG1-203ENST00000506441 A0A1B0GTH6 734 aa13□□□□□ -0.33
RETREG1-203ENST00000506441 EML1O00423 815 aa13□□□□□ -0.33
RETREG1-203ENST00000506441 PHKA2P46019 1235 aa13□□□□□ -0.33
RETREG1-203ENST00000506441 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
RETREG1-203ENST00000506441 GPC6Q9Y625 555 aaPredicted RBP13□□□□□ -0.33
RETREG1-203ENST00000506441 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
RETREG1-203ENST00000506441 ALDH16A1Q8IZ83 802 aa12.99□□□□□ -0.33
RETREG1-203ENST00000506441 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
RETREG1-203ENST00000506441 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
RETREG1-203ENST00000506441 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
RETREG1-203ENST00000506441 USP3Q9Y6I4 520 aa12.99□□□□□ -0.33
RETREG1-203ENST00000506441 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
RETREG1-203ENST00000506441 RTN1Q16799 776 aa12.98□□□□□ -0.33
RETREG1-203ENST00000506441 ANKIB1Q9P2G1 1089 aa12.98□□□□□ -0.33
RETREG1-203ENST00000506441 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
RETREG1-203ENST00000506441 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
RETREG1-203ENST00000506441 ZDHHC1Q8WTX9 485 aa12.97□□□□□ -0.33
RETREG1-203ENST00000506441 MYO19Q96H55 970 aa12.97□□□□□ -0.33
RETREG1-203ENST00000506441 PHACTR1Q9C0D0 580 aa12.97□□□□□ -0.33
RETREG1-203ENST00000506441 RHOQP17081 205 aa12.96□□□□□ -0.33
RETREG1-203ENST00000506441 PGBD3Q8N328 593 aa12.96□□□□□ -0.33
RETREG1-203ENST00000506441 SEPT3Q9UH03 358 aa12.96□□□□□ -0.33
RETREG1-203ENST00000506441 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
RETREG1-203ENST00000506441 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
RETREG1-203ENST00000506441 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
RETREG1-203ENST00000506441 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
RETREG1-203ENST00000506441 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
RETREG1-203ENST00000506441 HELQQ8TDG4 1101 aa12.95□□□□□ -0.34
RETREG1-203ENST00000506441 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
RETREG1-203ENST00000506441 FAM13AO94988 1023 aa12.94□□□□□ -0.34
RETREG1-203ENST00000506441 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
RETREG1-203ENST00000506441 ARSJQ5FYB0 599 aaPredicted RBP12.94□□□□□ -0.34
RETREG1-203ENST00000506441 TMCO4Q5TGY1 634 aa12.94□□□□□ -0.34
RETREG1-203ENST00000506441 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
RETREG1-203ENST00000506441 DNMT3LQ9UJW3 386 aa12.94□□□□□ -0.34
RETREG1-203ENST00000506441 SERPINB4P48594 390 aa12.93□□□□□ -0.34
RETREG1-203ENST00000506441 ALKBH2Q6NS38 261 aa12.93□□□□□ -0.34
RETREG1-203ENST00000506441 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
RETREG1-203ENST00000506441 ICMTO60725 284 aa12.92□□□□□ -0.34
RETREG1-203ENST00000506441 F11P03951 625 aa12.92□□□□□ -0.34
RETREG1-203ENST00000506441 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
RETREG1-203ENST00000506441 STIM2Q9P246 746 aa12.92□□□□□ -0.34
RETREG1-203ENST00000506441 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
RETREG1-203ENST00000506441 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
RETREG1-203ENST00000506441 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
RETREG1-203ENST00000506441 GAS2L1Q99501 681 aaPredicted RBP12.91□□□□□ -0.34
RETREG1-203ENST00000506441 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
RETREG1-203ENST00000506441 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
RETREG1-203ENST00000506441 MSX1P28360 303 aa12.9□□□□□ -0.34
RETREG1-203ENST00000506441 SCNN1AP37088 669 aa12.9□□□□□ -0.34
RETREG1-203ENST00000506441 TXLNAP40222 546 aa12.9□□□□□ -0.34
RETREG1-203ENST00000506441 COX20Q5RI15 118 aa12.9□□□□□ -0.34
RETREG1-203ENST00000506441 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms