RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 SMC4Q9NTJ3 1288 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 BTAF1O14981 1849 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 TRIM37O94972 964 aa20.31■□□□□ 0.84
MATR3-235ENST00000506147 STARD3NLO95772 234 aa20.31■□□□□ 0.84
MATR3-235ENST00000506147 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
MATR3-235ENST00000506147 DBF4Q9UBU7 674 aaPredicted RBP20.31■□□□□ 0.84
MATR3-235ENST00000506147 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
MATR3-235ENST00000506147 RREB1Q92766 1687 aa20.31■□□□□ 0.84
MATR3-235ENST00000506147 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
MATR3-235ENST00000506147 KIF16BQ96L93 1317 aa20.3■□□□□ 0.84
MATR3-235ENST00000506147 PLSCR1O15162 318 aa20.3■□□□□ 0.84
MATR3-235ENST00000506147 EIF2S2P20042 333 aaKnown RBP20.3■□□□□ 0.84
MATR3-235ENST00000506147 PTF1AQ7RTS3 328 aa20.3■□□□□ 0.84
MATR3-235ENST00000506147 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
MATR3-235ENST00000506147 BCAR3O75815 825 aa20.29■□□□□ 0.84
MATR3-235ENST00000506147 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
MATR3-235ENST00000506147 SLC4A9Q96Q91 983 aa20.29■□□□□ 0.84
MATR3-235ENST00000506147 SPON1Q9HCB6 807 aa20.29■□□□□ 0.84
MATR3-235ENST00000506147 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
MATR3-235ENST00000506147 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
MATR3-235ENST00000506147 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
MATR3-235ENST00000506147 ATP6V1AP38606 617 aa20.28■□□□□ 0.84
MATR3-235ENST00000506147 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
MATR3-235ENST00000506147 LAMB4A4D0S4 1761 aa20.28■□□□□ 0.84
MATR3-235ENST00000506147 SLC27A3Q5K4L6 730 aa20.27■□□□□ 0.84
MATR3-235ENST00000506147 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
MATR3-235ENST00000506147 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
MATR3-235ENST00000506147 C5P01031 1676 aa20.26■□□□□ 0.83
MATR3-235ENST00000506147 CYP19A1P11511 503 aaPredicted RBP20.26■□□□□ 0.83
MATR3-235ENST00000506147 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
MATR3-235ENST00000506147 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
MATR3-235ENST00000506147 PTPRCP08575 1304 aa20.26■□□□□ 0.83
MATR3-235ENST00000506147 MS4A1P11836 297 aa20.25■□□□□ 0.83
MATR3-235ENST00000506147 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
MATR3-235ENST00000506147 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
MATR3-235ENST00000506147 CACNA1FO60840 1977 aa20.25■□□□□ 0.83
MATR3-235ENST00000506147 LY75O60449 1722 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 UTRNP46939 3433 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 CHD4Q14839 1912 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 PDIA6Q15084 440 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 TJP1Q07157 1748 aa20.24■□□□□ 0.83
MATR3-235ENST00000506147 APBA3O96018 575 aa20.23■□□□□ 0.83
MATR3-235ENST00000506147 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
MATR3-235ENST00000506147 NOB1Q9ULX3 412 aaKnown RBP20.23■□□□□ 0.83
MATR3-235ENST00000506147 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
MATR3-235ENST00000506147 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
MATR3-235ENST00000506147 ITPK1Q13572 414 aa20.22■□□□□ 0.83
MATR3-235ENST00000506147 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
MATR3-235ENST00000506147 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
MATR3-235ENST00000506147 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
MATR3-235ENST00000506147 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
MATR3-235ENST00000506147 CNTNAP4Q9C0A0 1308 aa20.22■□□□□ 0.83
MATR3-235ENST00000506147 A1BGP04217 495 aa20.21■□□□□ 0.83
MATR3-235ENST00000506147 FLIIQ13045 1269 aa20.21■□□□□ 0.83
MATR3-235ENST00000506147 PDE3AQ14432 1141 aa20.21■□□□□ 0.83
MATR3-235ENST00000506147 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
MATR3-235ENST00000506147 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
MATR3-235ENST00000506147 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
MATR3-235ENST00000506147 RGPD4Q7Z3J3 1758 aa20.21■□□□□ 0.83
MATR3-235ENST00000506147 CCDC87Q9NVE4 849 aa20.2■□□□□ 0.82
MATR3-235ENST00000506147 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
MATR3-235ENST00000506147 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
MATR3-235ENST00000506147 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
MATR3-235ENST00000506147 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
MATR3-235ENST00000506147 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
MATR3-235ENST00000506147 CEP350Q5VT06 3117 aa20.19■□□□□ 0.82
MATR3-235ENST00000506147 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
MATR3-235ENST00000506147 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
MATR3-235ENST00000506147 PROSER3Q2NL68 480 aa20.18■□□□□ 0.82
MATR3-235ENST00000506147 INTS5Q6P9B9 1019 aaKnown RBP20.18■□□□□ 0.82
MATR3-235ENST00000506147 G2E3Q7L622 706 aa20.18■□□□□ 0.82
MATR3-235ENST00000506147 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
MATR3-235ENST00000506147 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
MATR3-235ENST00000506147 COL5A3P25940 1745 aaPredicted RBP20.18■□□□□ 0.82
MATR3-235ENST00000506147 TRIM27P14373 513 aa20.17■□□□□ 0.82
MATR3-235ENST00000506147 MYL6BP14649 208 aa20.17■□□□□ 0.82
MATR3-235ENST00000506147 ZBTB1Q9Y2K1 713 aa20.17■□□□□ 0.82
MATR3-235ENST00000506147 PLIN1O60240 522 aa20.16■□□□□ 0.82
MATR3-235ENST00000506147 FKBP5Q13451 457 aaPredicted RBP20.16■□□□□ 0.82
MATR3-235ENST00000506147 PROM2Q8N271 834 aa20.16■□□□□ 0.82
MATR3-235ENST00000506147 LRRC4BQ9NT99 713 aa20.16■□□□□ 0.82
MATR3-235ENST00000506147 ANXA1P04083 346 aa20.15■□□□□ 0.82
MATR3-235ENST00000506147 NEFLP07196 543 aa20.15■□□□□ 0.82
MATR3-235ENST00000506147 EIF5P55010 431 aaKnown RBP20.15■□□□□ 0.82
MATR3-235ENST00000506147 KSR2Q6VAB6 950 aa20.15■□□□□ 0.82
MATR3-235ENST00000506147 COPS6Q7L5N1 327 aa20.15■□□□□ 0.82
MATR3-235ENST00000506147 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
MATR3-235ENST00000506147 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
MATR3-235ENST00000506147 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
MATR3-235ENST00000506147 ABCC4O15439 1325 aa20.14■□□□□ 0.81
MATR3-235ENST00000506147 RPS6KA4O75676 772 aa20.14■□□□□ 0.81
MATR3-235ENST00000506147 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.81
MATR3-235ENST00000506147 A0A087WZG4 1122 aa20.13■□□□□ 0.81
MATR3-235ENST00000506147 RGL2O15211 777 aa20.13■□□□□ 0.81
MATR3-235ENST00000506147 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
MATR3-235ENST00000506147 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
MATR3-235ENST00000506147 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
MATR3-235ENST00000506147 TAF1LQ8IZX4 1826 aa20.11■□□□□ 0.81
MATR3-235ENST00000506147 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms