RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 NWD1Q149M9 1564 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 XRN1Q8IZH2 1706 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 ANAPC15P60006 121 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 ESCO1Q5FWF5 840 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 IP6K1Q92551 441 aa9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-204ENST00000506055 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 TEFQ10587 303 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 ANKARQ7Z5J8 1434 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 OS9Q13438 667 aaPredicted RBP9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 DNAAF4Q8WXU2 420 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 LRRC37A3O60309 1634 aa9.25□□□□□ -0.93
PPARGC1A-204ENST00000506055 SYCE3A1L190 88 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 CUL4AQ13619 759 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 POLA2Q14181 598 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 PPP1R9BQ96SB3 815 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 BRD1O95696 1058 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 ZNF530Q6P9A1 599 aaPredicted RBP9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 CWC27Q6UX04 472 aaKnown RBP9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 KIF1BPQ96EK5 621 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 SETD1BQ9UPS6 1966 aaKnown RBP9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 CEMIPQ8WUJ3 1361 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 AOX1Q06278 1338 aa9.24□□□□□ -0.93
PPARGC1A-204ENST00000506055 HSPA4P34932 840 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 CNTROBQ8N137 903 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 SPG7Q9UQ90 795 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 PXDNLA1KZ92 1463 aa9.23□□□□□ -0.93
PPARGC1A-204ENST00000506055 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 C9orf78Q9NZ63 289 aaPredicted RBP9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 SGSM2O43147 1006 aa9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 PLEKHO1Q53GL0 409 aaPredicted RBP9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 AKAP4Q5JQC9 854 aa9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 MAP3K2Q9Y2U5 619 aa9.22□□□□□ -0.93
PPARGC1A-204ENST00000506055 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 C1orf141Q5JVX7 400 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 RASEFQ8IZ41 740 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 RNF214Q8ND24 703 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 DBF4Q9UBU7 674 aaPredicted RBP9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 SNX14Q9Y5W7 946 aa9.21□□□□□ -0.93
PPARGC1A-204ENST00000506055 MBD3O95983 291 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 HOXB7P09629 217 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 PROSER3Q2NL68 480 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 CWF19L2Q2TBE0 894 aaKnown RBP9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 HSP90AB4PQ58FF6 505 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 KCNH5Q8NCM2 988 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 PA2G4Q9UQ80 394 aaKnown RBP9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 TUBGCP6Q96RT7 1819 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 ADCY9O60503 1353 aa9.21□□□□□ -0.94
PPARGC1A-204ENST00000506055 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 CPA1P15085 419 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 CLASRPQ8N2M8 674 aaKnown RBP9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 LSG1Q9H089 658 aaKnown RBP9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 RAD50Q92878 1312 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 LTN1O94822 1766 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 RNMTO43148 476 aaKnown RBP9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 DTNBO60941 627 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 GCP02774 474 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 AIMP1Q12904 312 aaKnown RBP9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 USP48Q86UV5 1035 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 ANKLE2Q86XL3 938 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 DIAPH3Q9NSV4 1193 aa9.2□□□□□ -0.94
PPARGC1A-204ENST00000506055 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 IFIT2P09913 472 aaKnown RBP9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 CASTP20810 708 aaKnown RBP9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 AK2P54819 239 aa9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 IL17RAQ96F46 866 aa9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 ORAI2Q96SN7 254 aa9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 FER1L4A9Z1Z3 1794 aa9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 AMOTQ4VCS5 1084 aa9.19□□□□□ -0.94
PPARGC1A-204ENST00000506055 EPB41L2O43491 1005 aaKnown RBP9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 PTH1RQ03431 593 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 KSR2Q6VAB6 950 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 RUFY3Q7L099 469 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 LIMCH1Q9UPQ0 1083 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 TTC41PQ6P2S7 1318 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 AACSQ86V21 672 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms