RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SNRPBP14678 240 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 NOS2P35228 1153 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 TEAD4Q15561 434 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 SH3PXD2AQ5TCZ1 1133 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 TAS1R3Q7RTX0 852 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 L3MBTL2Q969R5 705 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 ZNF232Q9UNY5 417 aa7.52□□□□□ -1.21
TOPBP1-204ENST00000505804 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 CAPN12Q6ZSI9 719 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 KIFC2Q96AC6 838 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 TRIM47Q96LD4 638 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
TOPBP1-204ENST00000505804 C11orf95C9JLR9 678 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 BRD1O95696 1058 aa7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 PLA2G4AP47712 749 aa7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 STAG2Q8N3U4 1231 aa7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 CHMP3Q9Y3E7 222 aa7.5□□□□□ -1.21
TOPBP1-204ENST00000505804 EML1O00423 815 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 FOXO3O43524 673 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 B4GALNT3Q6L9W6 998 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 VTI1AQ96AJ9 217 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 TIMMDC1Q9NPL8 285 aa7.49□□□□□ -1.21
TOPBP1-204ENST00000505804 TXLNAP40222 546 aa7.48□□□□□ -1.21
TOPBP1-204ENST00000505804 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-204ENST00000505804 NGLY1Q96IV0 654 aa7.48□□□□□ -1.21
TOPBP1-204ENST00000505804 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
TOPBP1-204ENST00000505804 PTSQ03393 145 aa7.47□□□□□ -1.21
TOPBP1-204ENST00000505804 POTEAQ6S8J7 498 aa7.47□□□□□ -1.21
TOPBP1-204ENST00000505804 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 ARID4AP29374 1257 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 ALDH16A1Q8IZ83 802 aa7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 GAS2L1Q99501 681 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 PHACTR1Q9C0D0 580 aa7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.46□□□□□ -1.22
TOPBP1-204ENST00000505804 A0A1B0GTH6 734 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 MSX1P28360 303 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 HIRAP54198 1017 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 SAP130Q9H0E3 1048 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 GPAMQ9HCL2 828 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 DYRK1BQ9Y463 629 aa7.45□□□□□ -1.22
TOPBP1-204ENST00000505804 SLC35F4A4IF30 521 aa7.44□□□□□ -1.22
TOPBP1-204ENST00000505804 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
TOPBP1-204ENST00000505804 TXNDC2Q86VQ3 553 aa7.44□□□□□ -1.22
TOPBP1-204ENST00000505804 C7orf43Q8WVR3 580 aa7.44□□□□□ -1.22
TOPBP1-204ENST00000505804 QTRT2Q9H974 415 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-204ENST00000505804 F11P03951 625 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 ATP4AP20648 1035 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 KCNA1Q09470 495 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 COX20Q5RI15 118 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 C1orf53Q5VUE5 145 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 GTF3C2Q8WUA4 911 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 LRFN2Q9ULH4 789 aa7.43□□□□□ -1.22
TOPBP1-204ENST00000505804 ABL1P00519 1130 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 SERPINB4P48594 390 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 C16orf46Q6P387 395 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 RIPOR1Q6ZS17 1223 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 CCER1Q8TC90 406 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 RUBCNLQ9H714 662 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 MTMR7Q9Y216 660 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
TOPBP1-204ENST00000505804 RTN1Q16799 776 aa7.41□□□□□ -1.22
TOPBP1-204ENST00000505804 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
TOPBP1-204ENST00000505804 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
TOPBP1-204ENST00000505804 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
TOPBP1-204ENST00000505804 DNMT3AQ9Y6K1 912 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-204ENST00000505804 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 DGKZQ13574 1117 aa7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 MYO19Q96H55 970 aa7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 CUEDC1Q9NWM3 386 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 GNEQ9Y223 722 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-204ENST00000505804 PATL2C9JE40 543 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-204ENST00000505804 ZNF211Q13398 564 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-204ENST00000505804 C11orf91Q3C1V1 193 aa7.39□□□□□ -1.23
TOPBP1-204ENST00000505804 PGBD3Q8N328 593 aa7.39□□□□□ -1.23
TOPBP1-204ENST00000505804 ZNF280CQ8ND82 737 aa7.39□□□□□ -1.23
TOPBP1-204ENST00000505804 NEUROD4Q9HD90 331 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms