RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 GOLGA6L3A6NEY3 463 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CHST3Q7LGC8 479 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SMARCE1Q969G3 411 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SDF4Q9BRK5 362 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SPC25Q9HBM1 224 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 H0YIN7 160 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CLGNO14967 610 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 GJC1P36383 396 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SULT6B1Q6IMI4 303 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 RAB3IL1Q8TBN0 382 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CEP63Q96MT8 703 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SLC7A5P2Q9GIP4 190 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 POLIQ9UNA4 740 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 PPP1R12BO60237 982 aaPredicted RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 PDE3AQ14432 1141 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 GAS2L2Q8NHY3 880 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 TMEM106CQ9BVX2 250 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 FTOQ9C0B1 505 aaKnown RBP eCLIP6.04□□□□□ -1.44
MATR3-211ENST00000505625 TSPYL1Q9H0U9 437 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 ATP5J2-PTCD1G3V325 749 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 CUL4BQ13620 913 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 GSE1Q14687 1217 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 LARP1Q6PKG0 1096 aaKnown RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 AACSQ86V21 672 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 PRPF38AQ8NAV1 312 aaKnown RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 PARD3BQ8TEW8 1205 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 RAB3GAP2Q9H2M9 1393 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 NDC80O14777 642 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 GNPATO15228 680 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 TSNARE1Q96NA8 513 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 FAM193BQ96PV7 902 aaPredicted RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 NOL7Q9UMY1 257 aaKnown RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 SPDYE16A6NNV3 312 aaPredicted RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 NOP56O00567 594 aaKnown RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 IFIT1P09914 478 aaKnown RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 SPDYE2Q495Y8 402 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 ZBTB3Q9H5J0 574 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 H7C1D1 291 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 DDB1Q16531 1140 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 LBHD1Q9BQE6 289 aaPredicted RBP6.04□□□□□ -1.44
MATR3-211ENST00000505625 KLF15Q9UIH9 416 aa6.04□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6L10A0A0M3HER8 536 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6L10A6NI86 522 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 TSTA3Q13630 321 aaPredicted RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 ARHGEF6Q15052 776 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 BRDTQ58F21 947 aaPredicted RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 LRRC45Q96CN5 670 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 SAP30BPQ9UHR5 308 aaKnown RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 ATP6V1DQ9Y5K8 247 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 CCDC18Q5T9S5 1454 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 ROCK1Q13464 1354 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 FERP16591 822 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 BAG4O95429 457 aaKnown RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 PSMA5P28066 241 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 KIF5BP33176 963 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 CEP57L1Q8IYX8 460 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 NOP58Q9Y2X3 529 aaKnown RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 AK9Q5TCS8 1911 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 PSMD2Q13200 908 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 CCDC91Q7Z6B0 441 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 ZBBXA8MT70 800 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 CCDC178Q5BJE1 867 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 JAKMIP3Q5VZ66 844 aa6.03□□□□□ -1.44
MATR3-211ENST00000505625 LRPPRCP42704 1394 aaKnown RBP6.03□□□□□ -1.44
MATR3-211ENST00000505625 RABEP1Q15276 862 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 FBXW10Q5XX13 1052 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 PPP1R42Q7Z4L9 355 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 CCDC89Q8N998 374 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 DPF3Q92784 378 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 TMEM110-MUSTN1A8MSY1 372 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 BACH1O14867 736 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 RALBP1Q15311 655 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 TRAPPC3LQ5T215 181 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 HOOK3Q86VS8 718 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 TMCO5AQ8N6Q1 288 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 CCDC87Q9NVE4 849 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 LRFN2Q9ULH4 789 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 SRGAP3O43295 1099 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 IFIT5Q13325 482 aaKnown RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 PIP4K2AP48426 406 aaPredicted RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 SNX16P57768 344 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 RASA3Q14644 834 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 RBM17Q96I25 401 aaKnown RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 ZC3H12CQ9C0D7 883 aaKnown RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 CEP126Q9P2H0 1117 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 COG6Q9Y2V7 657 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 PSDA5PKW4 1024 aaPredicted RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 ZKSCAN2Q63HK3 967 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 TSPY3P0CV98 308 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 TSPY8P0CW00 308 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 DCTN1Q14203 1278 aa6.02□□□□□ -1.45
MATR3-211ENST00000505625 QTRT2Q9H974 415 aaKnown RBP6.02□□□□□ -1.45
MATR3-211ENST00000505625 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms