RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 ARNT2Q9HBZ2 717 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 MRS2Q9HD23 443 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 NOL7Q9UMY1 257 aaKnown RBP8.94□□□□□ -0.98
CDH9-202ENST00000505020 KAT6BQ8WYB5 2073 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 DYTNA2CJ06 578 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 CBFA2T2O43439 604 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 KRT18P05783 430 aaKnown RBP8.94□□□□□ -0.98
CDH9-202ENST00000505020 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
CDH9-202ENST00000505020 CHPFQ8IZ52 775 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 PXYLP1Q8TE99 480 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 PARP2Q9UGN5 583 aa8.94□□□□□ -0.98
CDH9-202ENST00000505020 HIP1RO75146 1068 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 NOS2P35228 1153 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 TBC1D10BQ4KMP7 808 aaPredicted RBP8.93□□□□□ -0.98
CDH9-202ENST00000505020 NUTM1Q86Y26 1132 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 C1orf216Q8TAB5 229 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 STAC3Q96MF2 364 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 PCGF6Q9BYE7 350 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 SLKQ9H2G2 1235 aaPredicted RBP8.93□□□□□ -0.98
CDH9-202ENST00000505020 HOMER2Q9NSB8 354 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 INTUQ9ULD6 942 aa8.93□□□□□ -0.98
CDH9-202ENST00000505020 FGRP09769 529 aa8.92□□□□□ -0.98
CDH9-202ENST00000505020 SKIP12755 728 aa8.92□□□□□ -0.98
CDH9-202ENST00000505020 RASA1P20936 1047 aa8.92□□□□□ -0.98
CDH9-202ENST00000505020 ARHGAP4P98171 946 aa8.92□□□□□ -0.98
CDH9-202ENST00000505020 C1QTNF12Q5T7M4 302 aa8.92□□□□□ -0.98
CDH9-202ENST00000505020 USP17L5A8MUK1 530 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 SIM2Q14190 667 aaPredicted RBP8.91□□□□□ -0.98
CDH9-202ENST00000505020 PPP2R5AQ15172 486 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 LONRF1Q17RB8 773 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 RSPH1Q8WYR4 309 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
CDH9-202ENST00000505020 C12orf49Q9H741 205 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 AKAP2Q9Y2D5 859 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 C21orf2O43822 256 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 TRAPPC10P48553 1259 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 ZSCAN30Q86W11 494 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
CDH9-202ENST00000505020 MYCBPQ99417 103 aaPredicted RBP8.91□□□□□ -0.98
CDH9-202ENST00000505020 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
CDH9-202ENST00000505020 CCDC163A0A0D9SF12 145 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 PRMT3O60678 531 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 CT47B1P0C2W7 299 aaPredicted RBP8.9□□□□□ -0.98
CDH9-202ENST00000505020 CDC27P30260 824 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 EIF4G2P78344 907 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDH9-202ENST00000505020 SERINC3Q13530 473 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 TMEM95Q3KNT9 176 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 KANK3Q6NY19 840 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 VTI1BQ9UEU0 232 aa8.9□□□□□ -0.98
CDH9-202ENST00000505020 SORBS3O60504 671 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 MYL1P05976 194 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 RRM1P23921 792 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 INO80DQ53TQ3 878 aaPredicted RBP8.89□□□□□ -0.99
CDH9-202ENST00000505020 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
CDH9-202ENST00000505020 PPCSQ9HAB8 311 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 ENAMQ9NRM1 1142 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 TSPAN6O43657 245 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 CLCN6P51797 869 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 EGFL6Q8IUX8 553 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 TMX1Q9H3N1 280 aa8.89□□□□□ -0.99
CDH9-202ENST00000505020 TMEM238LA0A1B0GVL6 79 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 A6NJY4 79 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 RNASEH2AO75792 299 aaKnown RBP8.88□□□□□ -0.99
CDH9-202ENST00000505020 APPP05067 770 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 TGFB3P10600 412 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 ALDH1L2Q3SY69 923 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 CCDC93Q567U6 631 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 TAS1R3Q7RTX0 852 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDH9-202ENST00000505020 ISY1Q9ULR0 285 aaKnown RBP8.88□□□□□ -0.99
CDH9-202ENST00000505020 SYNPO2Q9UMS6 1093 aa8.88□□□□□ -0.99
CDH9-202ENST00000505020 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
CDH9-202ENST00000505020 CDC45O75419 566 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 NR1I2O75469 434 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 EXOSC10Q01780 885 aaKnown RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 DPYDQ12882 1025 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 NFE2Q16621 373 aaPredicted RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 SWI5Q1ZZU3 235 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 ZNF394Q53GI3 561 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 TEX19Q8NA77 164 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 PRIMPOLQ96LW4 560 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 FANCLQ9NW38 375 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 PCDHGB7Q9Y5F8 929 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 ADGRG1Q9Y653 693 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 MAP3K13O43283 966 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 MAP3K7O43318 606 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 CD46P15529 392 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 GJA5P36382 358 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms