RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 QSER1Q2KHR3 1735 aa12.05□□□□□ -0.48
TPM3-218ENST00000505010 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
TPM3-218ENST00000505010 ITGB4P16144 1822 aa12.04□□□□□ -0.48
TPM3-218ENST00000505010 CYP27B1O15528 508 aa12.04□□□□□ -0.48
TPM3-218ENST00000505010 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
TPM3-218ENST00000505010 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
TPM3-218ENST00000505010 TAF7Q15545 349 aaPredicted RBP12.04□□□□□ -0.48
TPM3-218ENST00000505010 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
TPM3-218ENST00000505010 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
TPM3-218ENST00000505010 ADCY9O60503 1353 aa12.04□□□□□ -0.48
TPM3-218ENST00000505010 MSL1Q68DK7 614 aa12.03□□□□□ -0.48
TPM3-218ENST00000505010 KIF3CO14782 793 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 BCAR3O75815 825 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
TPM3-218ENST00000505010 RARSP54136 660 aaKnown RBP12.02□□□□□ -0.49
TPM3-218ENST00000505010 TWISTNBQ3B726 338 aaPredicted RBP12.02□□□□□ -0.49
TPM3-218ENST00000505010 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
TPM3-218ENST00000505010 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 SMC4Q9NTJ3 1288 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 C5P01031 1676 aa12.02□□□□□ -0.49
TPM3-218ENST00000505010 LAMB4A4D0S4 1761 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 UBR2Q8IWV8 1755 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
TPM3-218ENST00000505010 PLIN1O60240 522 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 DNAJC5GQ8N7S2 189 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
TPM3-218ENST00000505010 CACNA1FO60840 1977 aa12□□□□□ -0.49
TPM3-218ENST00000505010 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
TPM3-218ENST00000505010 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
TPM3-218ENST00000505010 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
TPM3-218ENST00000505010 VAMP4O75379 141 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 TOMM70O94826 608 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 CABP4P57796 275 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 ALDH1L2Q3SY69 923 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
TPM3-218ENST00000505010 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 TUBGCP6Q96RT7 1819 aa11.99□□□□□ -0.49
TPM3-218ENST00000505010 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
TPM3-218ENST00000505010 WWC3Q9ULE0 1092 aa11.98□□□□□ -0.49
TPM3-218ENST00000505010 PCNTO95613 3336 aa11.98□□□□□ -0.49
TPM3-218ENST00000505010 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
TPM3-218ENST00000505010 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
TPM3-218ENST00000505010 KCNQ3O43525 872 aa11.97□□□□□ -0.49
TPM3-218ENST00000505010 CAPN15O75808 1086 aa11.97□□□□□ -0.49
TPM3-218ENST00000505010 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
TPM3-218ENST00000505010 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.49
TPM3-218ENST00000505010 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
TPM3-218ENST00000505010 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.49
TPM3-218ENST00000505010 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
TPM3-218ENST00000505010 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
TPM3-218ENST00000505010 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
TPM3-218ENST00000505010 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
TPM3-218ENST00000505010 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
TPM3-218ENST00000505010 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
TPM3-218ENST00000505010 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
TPM3-218ENST00000505010 LY75O60449 1722 aa11.94□□□□□ -0.5
TPM3-218ENST00000505010 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
TPM3-218ENST00000505010 ZNF790Q6PG37 636 aa11.94□□□□□ -0.5
TPM3-218ENST00000505010 CRBNQ96SW2 442 aa11.94□□□□□ -0.5
TPM3-218ENST00000505010 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
TPM3-218ENST00000505010 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
TPM3-218ENST00000505010 N4BP2Q86UW6 1770 aaPredicted RBP11.94□□□□□ -0.5
TPM3-218ENST00000505010 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
TPM3-218ENST00000505010 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
TPM3-218ENST00000505010 HOXB7P09629 217 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 MS4A1P11836 297 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 PRELPP51888 382 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 CCDC30Q5VVM6 783 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
TPM3-218ENST00000505010 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 AK7Q96M32 723 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
TPM3-218ENST00000505010 TRIM27P14373 513 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
TPM3-218ENST00000505010 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
TPM3-218ENST00000505010 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
TPM3-218ENST00000505010 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 CLUAP1Q96AJ1 413 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 TJP1Q07157 1748 aa11.91□□□□□ -0.5
TPM3-218ENST00000505010 PHF14O94880 888 aa11.9□□□□□ -0.5
TPM3-218ENST00000505010 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
TPM3-218ENST00000505010 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
TPM3-218ENST00000505010 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
TPM3-218ENST00000505010 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
TPM3-218ENST00000505010 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms