RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
NR1I3-220ENST00000505005 ARXQ96QS3 562 aa12.83□□□□□ -0.36
NR1I3-220ENST00000505005 CASZ1Q86V15 1759 aa12.83□□□□□ -0.36
NR1I3-220ENST00000505005 UBR2Q8IWV8 1755 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 APAF1O14727 1248 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 KCNQ4P56696 695 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
NR1I3-220ENST00000505005 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
NR1I3-220ENST00000505005 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
NR1I3-220ENST00000505005 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
NR1I3-220ENST00000505005 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
NR1I3-220ENST00000505005 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
NR1I3-220ENST00000505005 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
NR1I3-220ENST00000505005 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
NR1I3-220ENST00000505005 IL16Q14005 1332 aa12.81□□□□□ -0.36
NR1I3-220ENST00000505005 KCPQ6ZWJ8 1503 aa12.8□□□□□ -0.36
NR1I3-220ENST00000505005 CHL1O00533 1208 aa12.8□□□□□ -0.36
NR1I3-220ENST00000505005 PHF14O94880 888 aa12.8□□□□□ -0.36
NR1I3-220ENST00000505005 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
NR1I3-220ENST00000505005 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
NR1I3-220ENST00000505005 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
NR1I3-220ENST00000505005 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
NR1I3-220ENST00000505005 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
NR1I3-220ENST00000505005 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
NR1I3-220ENST00000505005 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
NR1I3-220ENST00000505005 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
NR1I3-220ENST00000505005 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
NR1I3-220ENST00000505005 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
NR1I3-220ENST00000505005 PTGER2P43116 358 aa12.78□□□□□ -0.36
NR1I3-220ENST00000505005 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
NR1I3-220ENST00000505005 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
NR1I3-220ENST00000505005 COL24A1Q17RW2 1714 aa12.77□□□□□ -0.36
NR1I3-220ENST00000505005 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
NR1I3-220ENST00000505005 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
NR1I3-220ENST00000505005 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
NR1I3-220ENST00000505005 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
NR1I3-220ENST00000505005 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
NR1I3-220ENST00000505005 COL15A1P39059 1388 aa12.77□□□□□ -0.37
NR1I3-220ENST00000505005 TJP1Q07157 1748 aa12.76□□□□□ -0.37
NR1I3-220ENST00000505005 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
NR1I3-220ENST00000505005 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
NR1I3-220ENST00000505005 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
NR1I3-220ENST00000505005 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 GYS1P13807 737 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 TGFB2P61812 414 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 KIF6Q6ZMV9 814 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
NR1I3-220ENST00000505005 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
NR1I3-220ENST00000505005 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
NR1I3-220ENST00000505005 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
NR1I3-220ENST00000505005 MIS18AQ9NYP9 233 aa12.74□□□□□ -0.37
NR1I3-220ENST00000505005 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-220ENST00000505005 KCNQ3O43525 872 aa12.73□□□□□ -0.37
NR1I3-220ENST00000505005 MMP10P09238 476 aa12.73□□□□□ -0.37
NR1I3-220ENST00000505005 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
NR1I3-220ENST00000505005 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
NR1I3-220ENST00000505005 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
NR1I3-220ENST00000505005 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
NR1I3-220ENST00000505005 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
NR1I3-220ENST00000505005 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
NR1I3-220ENST00000505005 LAMB4A4D0S4 1761 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 A1BGP04217 495 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
NR1I3-220ENST00000505005 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-220ENST00000505005 NPHP1O15259 732 aa12.71□□□□□ -0.37
NR1I3-220ENST00000505005 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
NR1I3-220ENST00000505005 TM4SF1P30408 202 aa12.71□□□□□ -0.37
NR1I3-220ENST00000505005 NYXQ9GZU5 481 aa12.71□□□□□ -0.37
NR1I3-220ENST00000505005 DDX21Q9NR30 783 aaKnown RBP eCLIP12.71□□□□□ -0.37
NR1I3-220ENST00000505005 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
NR1I3-220ENST00000505005 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
NR1I3-220ENST00000505005 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 TPTE2Q6XPS3 522 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
NR1I3-220ENST00000505005 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 ST5P78524 1137 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
NR1I3-220ENST00000505005 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
NR1I3-220ENST00000505005 PDE6BP35913 854 aa12.68□□□□□ -0.38
NR1I3-220ENST00000505005 FKBP8Q14318 412 aa12.68□□□□□ -0.38
NR1I3-220ENST00000505005 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms