RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
DDX41-204ENST00000504807 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
DDX41-204ENST00000504807 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
DDX41-204ENST00000504807 RASSF7Q02833 373 aa17.81■□□□□ 0.44
DDX41-204ENST00000504807 TRAPPC3LQ5T215 181 aa17.81■□□□□ 0.44
DDX41-204ENST00000504807 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
DDX41-204ENST00000504807 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
DDX41-204ENST00000504807 AIDAQ96BJ3 306 aa17.8■□□□□ 0.44
DDX41-204ENST00000504807 ABHD8Q96I13 439 aa17.8■□□□□ 0.44
DDX41-204ENST00000504807 CNTNAP4Q9C0A0 1308 aa17.79■□□□□ 0.44
DDX41-204ENST00000504807 GLTPD2A6NH11 291 aa17.79■□□□□ 0.44
DDX41-204ENST00000504807 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
DDX41-204ENST00000504807 CHRNA5P30532 468 aa17.79■□□□□ 0.44
DDX41-204ENST00000504807 CTCFP49711 727 aaPredicted RBP17.79■□□□□ 0.44
DDX41-204ENST00000504807 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
DDX41-204ENST00000504807 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
DDX41-204ENST00000504807 GYS1P13807 737 aa17.78■□□□□ 0.44
DDX41-204ENST00000504807 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
DDX41-204ENST00000504807 SLC52A2Q9HAB3 445 aa17.78■□□□□ 0.44
DDX41-204ENST00000504807 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
DDX41-204ENST00000504807 LBX1P52954 281 aa17.77■□□□□ 0.44
DDX41-204ENST00000504807 MLLT1Q03111 559 aaPredicted RBP17.77■□□□□ 0.44
DDX41-204ENST00000504807 BRCA1P38398 1863 aaKnown RBP17.77■□□□□ 0.43
DDX41-204ENST00000504807 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
DDX41-204ENST00000504807 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
DDX41-204ENST00000504807 RC3H1Q5TC82 1133 aaKnown RBP17.76■□□□□ 0.43
DDX41-204ENST00000504807 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
DDX41-204ENST00000504807 ARFGEF1Q9Y6D6 1849 aa17.76■□□□□ 0.43
DDX41-204ENST00000504807 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
DDX41-204ENST00000504807 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
DDX41-204ENST00000504807 RFC4P35249 363 aa17.75■□□□□ 0.43
DDX41-204ENST00000504807 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
DDX41-204ENST00000504807 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
DDX41-204ENST00000504807 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
DDX41-204ENST00000504807 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
DDX41-204ENST00000504807 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
DDX41-204ENST00000504807 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
DDX41-204ENST00000504807 POTECB2RU33 542 aa17.73■□□□□ 0.43
DDX41-204ENST00000504807 LMNB1P20700 586 aa17.73■□□□□ 0.43
DDX41-204ENST00000504807 IL17REQ8NFR9 667 aa17.73■□□□□ 0.43
DDX41-204ENST00000504807 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
DDX41-204ENST00000504807 SIPA1L3O60292 1781 aaPredicted RBP17.73■□□□□ 0.43
DDX41-204ENST00000504807 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
DDX41-204ENST00000504807 ADRA2BP18089 450 aa17.71■□□□□ 0.43
DDX41-204ENST00000504807 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
DDX41-204ENST00000504807 VEGFBP49765 207 aa17.7■□□□□ 0.42
DDX41-204ENST00000504807 DDR1Q08345 913 aa17.7■□□□□ 0.42
DDX41-204ENST00000504807 FKBP8Q14318 412 aa17.7■□□□□ 0.42
DDX41-204ENST00000504807 CHADLQ6NUI6 762 aa17.7■□□□□ 0.42
DDX41-204ENST00000504807 SBF1O95248 1867 aa17.69■□□□□ 0.42
DDX41-204ENST00000504807 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
DDX41-204ENST00000504807 WBP1LQ9NX94 342 aa17.69■□□□□ 0.42
DDX41-204ENST00000504807 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
DDX41-204ENST00000504807 POTEIP0CG38 1075 aa17.68■□□□□ 0.42
DDX41-204ENST00000504807 POTEJP0CG39 1038 aa17.68■□□□□ 0.42
DDX41-204ENST00000504807 ZBTB1Q9Y2K1 713 aa17.68■□□□□ 0.42
DDX41-204ENST00000504807 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
DDX41-204ENST00000504807 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
DDX41-204ENST00000504807 KCNQ3O43525 872 aa17.67■□□□□ 0.42
DDX41-204ENST00000504807 HSPA8P11142 646 aaKnown RBP17.67■□□□□ 0.42
DDX41-204ENST00000504807 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
DDX41-204ENST00000504807 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
DDX41-204ENST00000504807 RGS19P49795 217 aa17.65■□□□□ 0.42
DDX41-204ENST00000504807 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
DDX41-204ENST00000504807 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
DDX41-204ENST00000504807 USPL1Q5W0Q7 1092 aa17.64■□□□□ 0.41
DDX41-204ENST00000504807 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
DDX41-204ENST00000504807 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
DDX41-204ENST00000504807 COL15A1P39059 1388 aa17.63■□□□□ 0.41
DDX41-204ENST00000504807 NFKBIEO00221 500 aa17.62■□□□□ 0.41
DDX41-204ENST00000504807 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
DDX41-204ENST00000504807 U2AF1L5P0DN76 240 aaPredicted RBP17.62■□□□□ 0.41
DDX41-204ENST00000504807 TM4SF1P30408 202 aa17.62■□□□□ 0.41
DDX41-204ENST00000504807 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX41-204ENST00000504807 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
DDX41-204ENST00000504807 ZNF790Q6PG37 636 aa17.62■□□□□ 0.41
DDX41-204ENST00000504807 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
DDX41-204ENST00000504807 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 MCM10Q7L590 875 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 PASKQ96RG2 1323 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 HEG1Q9ULI3 1381 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
DDX41-204ENST00000504807 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
DDX41-204ENST00000504807 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
DDX41-204ENST00000504807 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
DDX41-204ENST00000504807 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
DDX41-204ENST00000504807 TEFQ10587 303 aa17.59■□□□□ 0.41
DDX41-204ENST00000504807 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
DDX41-204ENST00000504807 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.41
DDX41-204ENST00000504807 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.4
DDX41-204ENST00000504807 DDNO94850 711 aaPredicted RBP17.58■□□□□ 0.4
DDX41-204ENST00000504807 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.4
DDX41-204ENST00000504807 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
DDX41-204ENST00000504807 NFIXQ14938 502 aa17.58■□□□□ 0.4
DDX41-204ENST00000504807 NARFQ9UHQ1 456 aa17.58■□□□□ 0.4
DDX41-204ENST00000504807 SCN7AQ01118 1682 aa17.58■□□□□ 0.4
DDX41-204ENST00000504807 A1BGP04217 495 aa17.57■□□□□ 0.4
DDX41-204ENST00000504807 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
DDX41-204ENST00000504807 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms