RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 GEMIN8Q9NWZ8 242 aaKnown RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 UBAP1Q9NZ09 502 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 NOL7Q9UMY1 257 aaKnown RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 CDK5RAP3Q96JB5 506 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 ZWINTO95229 277 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 VPS53Q5VIR6 699 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 TSC22D3Q99576 134 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 CPLX4Q7Z7G2 160 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 TUBB4AP04350 444 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 RPSAP08865 295 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 KRT85P78386 507 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 DYNC1I2Q13409 638 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 NFXL1Q6ZNB6 911 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 YY1AP1Q9H869 796 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 TOP1P11387 765 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 SPECC1Q5M775 1068 aa11.97□□□□□ -0.49
ITGA1-203ENST00000504669 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
ITGA1-203ENST00000504669 ERC2O15083 957 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 CEBPZQ03701 1054 aaKnown RBP11.96□□□□□ -0.49
ITGA1-203ENST00000504669 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
ITGA1-203ENST00000504669 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 SAAL1Q96ER3 474 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 MACROD2A1Z1Q3 448 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 NLRP13Q86W25 1043 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 SPATA32Q96LK8 384 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 WWC3Q9ULE0 1092 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 CCDC110Q8TBZ0 833 aa11.96□□□□□ -0.49
ITGA1-203ENST00000504669 JPH2Q9BR39 696 aaPredicted RBP11.96□□□□□ -0.49
ITGA1-203ENST00000504669 CTAGE15A4D2H0 777 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 CTAGE8P0CG41 777 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 CTAGE4Q8IX94 777 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 GOLGA3Q08378 1498 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 MUM1Q2TAK8 710 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 CHCHD3Q9NX63 227 aaKnown RBP11.96□□□□□ -0.5
ITGA1-203ENST00000504669 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.5
ITGA1-203ENST00000504669 AKNAQ7Z591 1439 aa11.96□□□□□ -0.5
ITGA1-203ENST00000504669 PRR16Q569H4 304 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 TMC6Q7Z403 805 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 SDCCAG8Q86SQ7 713 aaPredicted RBP11.95□□□□□ -0.5
ITGA1-203ENST00000504669 HAUS1Q96CS2 278 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 SELENOSQ9BQE4 189 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 PHACTR2O75167 634 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 PAFAH1B1P43034 410 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 SKILP12757 684 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 HLTFQ14527 1009 aaKnown RBP eCLIP11.95□□□□□ -0.5
ITGA1-203ENST00000504669 JADE2Q9NQC1 790 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 FRMD4BQ9Y2L6 1034 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 PDCP20941 246 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 ISM2Q6H9L7 571 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 LCA5Q86VQ0 697 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 MTUS1Q9ULD2 1270 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 PPFIA2O75334 1257 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 SSFA2P28290 1259 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 RGL3Q3MIN7 710 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 WDR75Q8IWA0 830 aaKnown RBP11.95□□□□□ -0.5
ITGA1-203ENST00000504669 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
ITGA1-203ENST00000504669 TTC36A6NLP5 189 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 LIG3P49916 1009 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 NEK4P51957 841 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 DTNBP1Q96EV8 351 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BAG1Q99933 345 aaPredicted RBP11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 PSMA5P28066 241 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 SPA17Q15506 151 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 NCAPGQ9BPX3 1015 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 GNG11P61952 73 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
ITGA1-203ENST00000504669 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BAIAP2L1Q9UHR4 511 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BLVRAP53004 296 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 POLE2P56282 527 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 NDUFAB1O14561 156 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 DNAJC8O75937 253 aaPredicted RBP11.94□□□□□ -0.5
ITGA1-203ENST00000504669 TUBB4BP68371 445 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 RBM26Q5T8P6 1007 aaKnown RBP11.94□□□□□ -0.5
ITGA1-203ENST00000504669 MFSD4BQ5TF39 518 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 PHLDB2Q86SQ0 1253 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 STMN4Q9H169 189 aaPredicted RBP11.94□□□□□ -0.5
ITGA1-203ENST00000504669 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 ANO10Q9NW15 660 aa11.94□□□□□ -0.5
ITGA1-203ENST00000504669 STK38Q15208 465 aa11.93□□□□□ -0.5
ITGA1-203ENST00000504669 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
ITGA1-203ENST00000504669 TBC1D31Q96DN5 1066 aa11.93□□□□□ -0.5
ITGA1-203ENST00000504669 CCDC155Q8N6L0 562 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms